Gene Sputcn32_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1864 
Symbol 
ID5080175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2132146 
End bp2133585 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content47% 
IMG OID640499022 
Productpyruvate kinase 
Protein accessionYP_001183386 
Protein GI146292962 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGCA GAACCAAAAT CGTCACCACA CTCGGCCCCG CCACTGATCG TGATGATAAT 
CTACGCCGCA TTATCGCGGC AGGTGCAAAT GTTGTACGTC TTAACTTTTC CCACGGCTCC
CCCGAAGATC ATCTCAAACG AGCAACTCAA GCTCGTGAAA TAGCAAAAGA ATTAGGTGTT
CACGTTGCTA TTCTTGGTGA CTTACAAGGG CCTAAAATCC GCGTTTCTAC TTTCAAAGAC
AACAAGAAAG TTCAGCTCAA ACTCGGTCAA GCCTATGTTT TAGATGCTGA GCTCGCTAAA
GGTGAAGGTG ACGAGACCCA AGTCGGTATC GATTACAAGC AATTGCCAGA CGACGTGACG
GTCGGCGATA TCCTGATGTT AGATGATGGC CGTGTTCAAT TACGTGTTGA AGGTGTTGAA
GGCCGTAAGG TTCACACCAC AGTGACGGTT GCGGGTCCTT TATCAAACAA TAAGGGGATT
AATAAGCAAG GTGGTGGTTT ATCTGCCGCG GCGCTGACCG AAAAAGATAA AGCAGACATT
CTGACGGCCG CAATGATCCA AGTGGATTAT TTAGCCGTGT CTTTCCCACG TAGTGGTGCT
GATCTCGATT ACGCCCGCGA TCTTGCCCGT CAAGCAGGTT GTAATGCACT GATTGTTGCT
AAAGTTGAAC GTGCAGAAGC CGTTGCCACT GATGAAGCGA TGGATGATGT GATCTTAGCT
TCTGACGTTG TTATGGTTGC CCGTGGTGAC TTAGGCGTTG AAATTGGTGA TGCTGCACTC
GTTGCAGTGC AAAAGAAACT TATCGCCCGT TCACGTCAAC TCAACAAAAT CGTCATTACA
GCGACACAAA TGATGGAGTC GATGATTTCA AGCCCAATGC CAACCCGCGC CGAAGTAATG
GACGTGGCAA ACGCTGTGCT CGACGGGACT GATGCCGTAA TGTTATCAGC CGAAACCGCT
GCGGGAGATT TTCCTGAAGA AACCGTTAAG GCGATGGCAA ATGTGTGTGT CGGTGCAGAG
TCGCACCCAA GTGTTAAAGT GTCTAAGCAT AGATTAGATG CACGCTTTAC TTCTGTGGAA
GAGACCATTG CCCTATCGAC TATGTATGCA GCAAACCATT TAGAAGGTGT TAAAGCGATT
ATCGCCTTAA CCGAATCGGG TGCAACACCT CAGATGATGT CGCGCATCAG TTCTTCACTG
CCCATCCTTG GTTTATCACG CCATGCGACA ACACTCGCTA AGATGGCATT ATATCGCGGT
GTATTACCGA TTTACTTTGA TTCAACTATC TATCCAGCCG ATCTATTAGC ACAAAAAGCC
TTAGAGTCAC TGACAACCGC TGGTTATTTA CAAAGCGGCG ATTTAGTTTT GATGACCAAG
GGCGATGCAA TGGAAACTAT CGGTGGCACT AACACTTGTA AGGTGTTGAT TGTTGCCTAA
 
Protein sequence
MFRRTKIVTT LGPATDRDDN LRRIIAAGAN VVRLNFSHGS PEDHLKRATQ AREIAKELGV 
HVAILGDLQG PKIRVSTFKD NKKVQLKLGQ AYVLDAELAK GEGDETQVGI DYKQLPDDVT
VGDILMLDDG RVQLRVEGVE GRKVHTTVTV AGPLSNNKGI NKQGGGLSAA ALTEKDKADI
LTAAMIQVDY LAVSFPRSGA DLDYARDLAR QAGCNALIVA KVERAEAVAT DEAMDDVILA
SDVVMVARGD LGVEIGDAAL VAVQKKLIAR SRQLNKIVIT ATQMMESMIS SPMPTRAEVM
DVANAVLDGT DAVMLSAETA AGDFPEETVK AMANVCVGAE SHPSVKVSKH RLDARFTSVE
ETIALSTMYA ANHLEGVKAI IALTESGATP QMMSRISSSL PILGLSRHAT TLAKMALYRG
VLPIYFDSTI YPADLLAQKA LESLTTAGYL QSGDLVLMTK GDAMETIGGT NTCKVLIVA