Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1837 |
Symbol | |
ID | 5079204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2097792 |
End bp | 2100491 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498987 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_001183359 |
Protein GI | 146292935 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.515671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCAAC GTACATTAAA CTCCTTATTT AAACCGACTT CCGTTGCCAT TATTGGCGCC TCGAATACCG AGAAACGCGC TGGTAATGTG TTGATGAAAA ACCTGCTCTC CAGTGGTTTT TCTGGGCCAA TTATGCCTGT TACGCCTAAA TATCGGGCTG TGATGGGCGT GCTTGCCTAT CCCAATATTG AGGCCCTTCC GATAAAACCC GATTTAGCCG TGATTTGTAC CCGTGCTTGC CGCGTGCCCG CTATTGTTGA AACCTTAGCT CAGTTTGGTT GTAAAGTGGC CATTATTATG GCCTCAGGTA TGGCACAGGA GTTTAATGAG GAGGGTGTGA GTTTGCTCGA ACTTACGATG CAACATGCTA AGCGTTATGG AATGCGTATC CTTGGGCCGA ATAGTTTAGG TATGTTATTG CCTCCACTTG GTTTAAATGC CAGTTTAGCC CATGCCAGCG CGCTTCCTGG GAAAATTGCT TTCGTGTCTC AATCCGCCGC CATTTGCACG ACGGTACTCG ATTGGGCCAA TAATAAAGGC ATAGGGTTTT CTTCTTTTAT TTCTCTTGGT GACGCCACCG ATATTAACTT CGATGAATTA CTCGATTACT TAGGCCGCGA TAGCCGCACC AGCGCCATTA TGTTGTATAT CGATTCAGTC AATGAAAAGC GCCATTTTTT ATCCGCCGCC CGCGCTGCTT CTCGCAATAA ACCCATCCTC GTCATTAAAT CGGGCCGAAG CCCTGAAGGT GCCCGCGCCG CAAAATTGCA CACGGGTGGA GTTGGCGGTA ATGATGCCGT GTATGAAGCG GCATTTCGCC GCGCAGGTAT GTTGCGAGTT AATGATTTAA TTGAACTTTT TGCGGCGGTA GAAAGCCTAG CTCATTCTAA CCCGCTCCAA GGGGAACGCT TAGGTATTAT CAGTAATGGT GGCGGCCCTG CCGTATTAGC AGTCGATGAG TTAATTTTAC GTGGTGGAAA GCTGGCCGAA CTCACAGAGG ACACCATTGC CCAGCTTGAG GCCGTGTTAC CCAGCACTTG GTCACGGCAA AATCCTGTCG ATATTATCGG TGATGCCGAT GCGACTCGTT ATGCTAAGGC ATTGAGTATT TTGATGGATT GTAATGAGTT AGATGCCATA TTAGTGTTAC ATTCACCGTC AGCACTTGGT GAGAGTGTTG AAATTGCTGA TGCATTGATC AAGACCATTC ACACCCATCC CAAAAAGAAT CGGTTGAATA TTCTCACCAA CTGGAGCGGG GAAGATTCGG CCTATCAGGC GAGAAAGCGA TTTACAAAGG GCGGCATTCC GACCTATCGC ACACCTGAAG GTGCCGTGGG TGCGTTTATG CACATGGTTG AATATCGCCG TAACCAAAAA TTACTGCAGG AAGTCCCCCA ATCCATTCCC GATAATATTC CAACCGATAG TCAAACCGCG CGAAAATTAC TGCAAGCTGC GCAAGCTAAA GGAAAATCGG TACTCGAAAC CCATGAGGCG ATCCCCATTT TGCGTGCTTA CGGCCTCAAC ACTATTGATA CTTGGTTTGT TAAAGATGCC GATGAAGCCG TTGCTATCGC CAATGAGGCG GGTTATCCCT TGGCTTTAAA AGTCCAATCA CCCAATATTT TGCATAAATC CGATGTGCAT GGGGTCATGC TTAATTTAAC GTCGGCTGAA GATATCCGTC ATGCGGCGAA CGCGATTACG CAAAGGGTGC ATCAGGCGAA TCCCGACGCC ATTATCGAAG GTATGATAGT GCAAAAAATG GCGCTAACGG CGGGTGCACA GGAGATCCGC GTGGCCGTGA TAAGCGATCC CGTCTTTGGC CCTGCCATTT GTTTAGGTGA AGGCGGCTCA GAATGGGATC CCACAAACGA TGCCGCTGTT GCCCTGCCCC CACTCAATAT GGCATTAGCG CGCTATATGG TGATCCAAGC ATTAAAGACC CACAAACTAA AAGACCGGCA TTTACCCTTA GGTTTAGATA TGAATGCCCT GTGTGTGATG CTAACGCAGA TCTCCCACAT TATTATCGAC TGCCCCGAAA TTGCCTCATT AGATTTAAAT CCCGTATTAG CAGCGGGAGA AAAGATCACC CTGCTCGATG TGAATATTCG CTTGCATGAT GCTAATACCG ACAGCACTTC CCGCCTCGCG ATCATGCCCT ATCCCAAGGA ATTAGAAGAA GAAGCCGAAC TTAAAAATGG CCTAAAGGTG ATGCTAAGGC CAATTTTACC CGAGGATGAA CCTAAGCATT TGGCCTTCGA TAACTCGCTA TCCGATGAAG ACAGGTACAA ACGCTATTTT GGGGTACGTT CTAAAATGAC CCATGAGGAA ATGGCGGTAT TAACCCAAAT CGATTACGCC CGAGAAATGG CGTTTATCGC GACCGCAAAA GGCCCAGATG GTGATGATAT CACCCTAGGC GCAGTAAGGG CTTCTATCGA TCCCGATAAT ACAGAAGCCG AATTTGCCAT GGCAGTACGC GGCGATCACC AAGGCATAGG TCTAGGCAAG TTACTACTCG AAAAACTCAT TAAGTATTAT CAAGCCAACG ATACGGCAGT ACTCACAGGT TTTACCATGT TTGAAAACCG TAATATGGCA AGCCTAGCAA AAAGTTTAGG ATTTAAAGTC ACCTTCGATA TGGAGGAGCA TTTGATCAAA ATGCATATGG ATCTTAAACA AAACCAATAA
|
Protein sequence | MSQRTLNSLF KPTSVAIIGA SNTEKRAGNV LMKNLLSSGF SGPIMPVTPK YRAVMGVLAY PNIEALPIKP DLAVICTRAC RVPAIVETLA QFGCKVAIIM ASGMAQEFNE EGVSLLELTM QHAKRYGMRI LGPNSLGMLL PPLGLNASLA HASALPGKIA FVSQSAAICT TVLDWANNKG IGFSSFISLG DATDINFDEL LDYLGRDSRT SAIMLYIDSV NEKRHFLSAA RAASRNKPIL VIKSGRSPEG ARAAKLHTGG VGGNDAVYEA AFRRAGMLRV NDLIELFAAV ESLAHSNPLQ GERLGIISNG GGPAVLAVDE LILRGGKLAE LTEDTIAQLE AVLPSTWSRQ NPVDIIGDAD ATRYAKALSI LMDCNELDAI LVLHSPSALG ESVEIADALI KTIHTHPKKN RLNILTNWSG EDSAYQARKR FTKGGIPTYR TPEGAVGAFM HMVEYRRNQK LLQEVPQSIP DNIPTDSQTA RKLLQAAQAK GKSVLETHEA IPILRAYGLN TIDTWFVKDA DEAVAIANEA GYPLALKVQS PNILHKSDVH GVMLNLTSAE DIRHAANAIT QRVHQANPDA IIEGMIVQKM ALTAGAQEIR VAVISDPVFG PAICLGEGGS EWDPTNDAAV ALPPLNMALA RYMVIQALKT HKLKDRHLPL GLDMNALCVM LTQISHIIID CPEIASLDLN PVLAAGEKIT LLDVNIRLHD ANTDSTSRLA IMPYPKELEE EAELKNGLKV MLRPILPEDE PKHLAFDNSL SDEDRYKRYF GVRSKMTHEE MAVLTQIDYA REMAFIATAK GPDGDDITLG AVRASIDPDN TEAEFAMAVR GDHQGIGLGK LLLEKLIKYY QANDTAVLTG FTMFENRNMA SLAKSLGFKV TFDMEEHLIK MHMDLKQNQ
|
| |