Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1829 |
Symbol | pheT |
ID | 5079196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2090071 |
End bp | 2092458 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498979 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001183351 |
Protein GI | 146292927 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000186413 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTA GCGAATCTTG GCTTCGTGAA TGGGTAAACC CTTCAGTCAG CCGTGAAGCA TTATCCCACC AGATCACTAT GGCCGGCCTT GAGGTTGATG GCGTAGATCC TGTTGCCGCC GATTTTAATG GTGTGGTAGT GGGTGAAGTG GTTGAATGTG GTCAGCATCC CGATGCCGAT AAATTGCGCG TGACCAAAGT CAGCGTGGGC ACAGGCGAGC TTATCGATAT CGTCTGCGGT GCACCAAACT GCCGTCAGGG TCTTAAAGTG GCCGTGGCTA TGGTTGGTGC CGTATTACCT GGCGATTTCA AAATCAAGAA AGCCAAGCTG CGTGGCATGC CATCAGAAGG CATGTTGTGT TCATACAGCG AGCTTGGCAT TAACGTCGAA AGCGATGGCA TTATTGAACT GCCATTGGAC GCGCCATTAG GCACGGATCT GCGTGAGTAT CTCAAGCTTG ATGACGCCGT GATAGAAGTG GATTTAACCG CTAACCGTGC CGATTGTTTA GGCATGGTAG GTCTTGCCCG TGAAGTGGGC GTGTTAAACC GCCAAGCAGT GGTTGAGCCA CAGTGGCAAG CCGTTATGCC AACGATAGAT GCTAAAGTAA CCATTAACGT TAAGGCGCCA ACGGCATGCC CCCGCTACTT AGGTCGCGTG GTGAAAAACG TCAATGTGAA AGCGGCAACG CCTTTATGGA TGCAGGAAAA ACTGCGCCGT AGCGGTATTC GCTCTATCGA TCCTATTGTT GATATCACTA ACTTTGTGTT AGTTGAATTT GGTCAACCGA TGCACGCTTT CGATCTGGCC AAGCTAACGG GCGATATCCA AGTGCGTTTA GGTAACGGTG ATGAGAAAAT CACTCTGCTT GATGGCAGCG AAGTGACGAT TCCAAGCGAT ACCTTAGTGA TCGCCGACGA TGCGCGTCCA TTAGCCCTTG CAGGCGTGTT TGGCGGCGAA TACTCAGGGG TAAGCGACAC GACCCAAGAT ATTCTACTTG AATGTGCCTT CTTCGCGCCT TTAGCGATTA TGGGTAAATC ACGTCGCTTA GGTTTGCACA CAGATTCATC ACACCGCTTT GAACGTGGTG TTGACCCTGA GATGCAACAC AAGGTTATCG ACCGTGCGAC CCGTTTAGTA CTTGATATCT GTGGCGGCGA AGCGGGCCCA GTGGTGGAAG CGAAATCGGA TGCTGATTTA CCCAAACCTG CACAAATCCT GTTACGTCGT AGCAAGTTAG ATAGAATTTT GGGGCACCAT GTGCCAGACA CTGATGTGGT TGAGATTCTG CAACGTCTAG GCTTTAGTGT GGTTGCTAGC CAAGATAGCT GGCAGGTGAC CACGGCCACG TATCGCTTCG ATATGGCGAT TGAGGAAGAC TTAATCGAAG AAGTGGCGCG TATCTACGGT TATGACAATA TTCCTAATAC GGCGCCTGTT GCCGCGCTGC GTATGTCAGA TCATAAAGAA TCTGACTTAA GCCTAAAACG CGTTCGTGCC TTACTGGTCG CTCGCGGCTT CCAAGAAGCG GTTACCTATA GCTTTGTTGA TCCGAAATTG CAAAATCTGG TGCATCCCGG TGAGCAGGCT ATGGTGTTAC CAAACCCCAT TTCCAGTGAA ATGTCGGCCA TGCGCCTGTC AATGTTCACT GGTTTATTGG CCGCCGTTGG CTACAACCAA AGTCGTCAGC AGAGTCGAGT GAGACTTTTT GAAACTGGCC TGCGCTTTGT TCCTGATATC AATGCAGAAT CCGGTGTAAG ACAGCAAGCT ATGCTCGCTT GTGTCATTAC AGGGCTTCAA AATGATGAAC ATTGGGCTAT GGAATCGAAA ACCGTTGATT TTTTCGACCT TAAAGGTGAT TTAGAAGCAA TTATCGGCTT GACAGTTTCC GCGTCAGAAT TTAGCTTTAG AGTAGCAACG CATTCTGCCC TCCATCCGGG GCAATGTGCT GAAATATTGA GAAATGATCG AGTGATCGGT CATATAGGTG CAATCCATCC TAGTTTGGAG AAGCCTTTTG GACTCAATGG TAAAACCATC GTTTTTGAGT TGGAATTGGA TGCTTTATTG CATACCAGTT TACCGCTAGC CCAAGCTGTA TCTAAGTTTC CAGCTAATCG TCGTGATATC GCAGTTGTAG TAGATGAGAG TGTATCTGCA GGCGATGTAA TGAAAGTGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACTTAGGTAA AGGTGTTGAA CCCGGCAAGA AGAGCCTGGC GATAGCACTT ACATTACAAG ACACTACTCG TACACTTGAG GAAAAAGAGA TCGCTGAGAC AGTTGAATCA GTTGTTTCTG CCCTTAAGAC CGAGTTCAAC GCATCGTTGA GGGATTAA
|
Protein sequence | MKFSESWLRE WVNPSVSREA LSHQITMAGL EVDGVDPVAA DFNGVVVGEV VECGQHPDAD KLRVTKVSVG TGELIDIVCG APNCRQGLKV AVAMVGAVLP GDFKIKKAKL RGMPSEGMLC SYSELGINVE SDGIIELPLD APLGTDLREY LKLDDAVIEV DLTANRADCL GMVGLAREVG VLNRQAVVEP QWQAVMPTID AKVTINVKAP TACPRYLGRV VKNVNVKAAT PLWMQEKLRR SGIRSIDPIV DITNFVLVEF GQPMHAFDLA KLTGDIQVRL GNGDEKITLL DGSEVTIPSD TLVIADDARP LALAGVFGGE YSGVSDTTQD ILLECAFFAP LAIMGKSRRL GLHTDSSHRF ERGVDPEMQH KVIDRATRLV LDICGGEAGP VVEAKSDADL PKPAQILLRR SKLDRILGHH VPDTDVVEIL QRLGFSVVAS QDSWQVTTAT YRFDMAIEED LIEEVARIYG YDNIPNTAPV AALRMSDHKE SDLSLKRVRA LLVARGFQEA VTYSFVDPKL QNLVHPGEQA MVLPNPISSE MSAMRLSMFT GLLAAVGYNQ SRQQSRVRLF ETGLRFVPDI NAESGVRQQA MLACVITGLQ NDEHWAMESK TVDFFDLKGD LEAIIGLTVS ASEFSFRVAT HSALHPGQCA EILRNDRVIG HIGAIHPSLE KPFGLNGKTI VFELELDALL HTSLPLAQAV SKFPANRRDI AVVVDESVSA GDVMKVIRKV GENQLVGINL FDVYLGKGVE PGKKSLAIAL TLQDTTRTLE EKEIAETVES VVSALKTEFN ASLRD
|
| |