| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1807 |
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| Symbol | |
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| ID | 5079268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2052838 |
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| End bp | 2054382 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640498957 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001183330 |
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| Protein GI | 146292906 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000176314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTC ACCCTAAAAT GTCTGAAAAT GCTGTTATTA AACAAGCCGA CTTTATTGAA
AGTGTGGCGG ATGCCCTGCA ATACATTTCT TATTACCACC CAAAGGATTT TGTTGATGCC
ATGAGCGAAG CTTATGAGCG TGAACAAAGT GCTGCGGCGA AGGATGCGAT TGCCCAGATC
TTAATTAACT CGCGCATGTC GGCCGAAGGT AAGCGTCCTT TGTGTCAAGA CACTGGGATT
GTGACCACGT TTGTAAAAGT GGGTATGGGT GTAAAGTGGG ACAAAACCGA TATGACGATT
CAGGAAATGG TTGACGAAGG TGTTCGTCGT GCCTATACCA ATCCTGATAA CCCACTGCGC
GCATCGATAG TGTCTGATCC TGCGGGCAGC CGTAAAAATA CCAAAGATAA CACCCCATCT
GTGGTGCATA TCGACATGGT GCCTGGTAAC CACATCGAAG TGGCGATTGC GGCTAAAGGC
GGCGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCTGACGA TATCGCCGCT
TGGGTAGAAA AAACGCTACC GACCATGGGC GCAGGCTGGT GCCCTCCGGG AATGCTAGGC
ATAGGTATCG GCGGCACGGC GGAAAAAGCG GCCGTATTAG CCAAAGAAGC GTTGATGGAA
AGCGTGGATA TCCATGAGTT GCTGGCGCGC GGTGCCCAAA CGACCGAAGA AAAACTGCGG
TTAGATATTT TTGAGCGCGC GAATAACTTA GGCATAGGTG CGCAGGGTCT TGGCGGTTTA
ACCACAGTGT TAGACGTTAA AATCAAATCG GCGCCAACCC ACGCGGCCTC AAAACCTGTG
GTGATGATCC CCAACTGCGC GGCCACTCGC CATGTTCATT TTCATTTAGA CGGCTCGGGT
CCTGCGGAAT TAATGCCGCC GTCACTCGCC GATTGGCCAG AAATTACCCG TGAAGTGGGT
GATGATGTGC GCCGTGTTAA CTTAGATACT GTCACTCAAG CGGATATCGA GCAATGGCAG
AGCGGTGAAA CCATTCTGCT CAGCGGTAAA ATGCTCACGG GTCGCGATGC TGCCCATAAG
CGCATTCAAA GCCTGATTGA AAGTGGTGAA GGTCTGCCAG AAGGTGTGGA CTTTACCGGT
AAGTTTATCT ACTACGTTGG CCCAGTAGAT CCAGTAGGCA CTGAAGTGGT AGGGCCAGCG
GGTCCAACCA CAGCCACCCG TATGGATAAA TTCACTGACT TGATGTTAGA GAAAACTGGT
CTTATGGGCA TGATCGGCAA GGCCGAGCGC GGCCCTGCGA CGGTTGAATC TATCAAGAAA
CACAAAGCCG TTTATTTAAT GGCCGTTGGC GGCGCTGCGT ATTTAGTATC GAAAGCGATT
AAACATTCTC GCGTGGTGGC CTTTGCCGAT TTAGGCATGG AAGCGATTTA CGAGTTTGAT
GTGCAAGATA TGCCAGTGAC AGTGGCCGTG GACTCCAATG GCGTCAACGC CCATGAAACG
GGTCCTGCGA TTTGGAAAGT GAATATCGCC AACGCGAAAG CCTAA
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| Protein sequence | MSSHPKMSEN AVIKQADFIE SVADALQYIS YYHPKDFVDA MSEAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKVGMG VKWDKTDMTI QEMVDEGVRR AYTNPDNPLR
ASIVSDPAGS RKNTKDNTPS VVHIDMVPGN HIEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELLAR GAQTTEEKLR
LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGSG
PAELMPPSLA DWPEITREVG DDVRRVNLDT VTQADIEQWQ SGETILLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGTEVVGPA GPTTATRMDK FTDLMLEKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KHSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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