| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1776 |
|---|
| Symbol | |
|---|
| ID | 5079235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2022701 |
|---|
| End bp | 2023504 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640498925 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001183300 |
|---|
| Protein GI | 146292876 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000249519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACTA TAACAGCGAT TAAAGCCTTT AATGACAATT ATATCTGGGT GTTACAACAA
ACTCCCCACT CGCAGGTTTA TGTTGTCGAT CCTGGCGATG CTAAGGTCGT TATTGCCTAT
CTGGTCTCCC ATCAGTTAGC ACTCGCTGGT ATTTTGCTCA CGCACCATCA CCAAGATCAT
ACTGGCGGTG TCGGGGAACT TAAACGTTAC GTTGAGCAAA CTTCATCACA AACACTGCAG
GTTTACGGAC CACAAAAAGA AAATATTGCT CATGTCAATG TACCACTTAA TCCTGAAATG
CGAACTGAAC TCACCCTTCC TTTCCTTAAC GCTCAAATAC AAGTGCTGAA CGTGCCAGGC
CATACAGCTG GACATATTGC CTATTTCATT GAGGATGCGC TTTTTTGTGG TGATACTTTA
TTCAGTGCAG GCTGTGGTCG ACTATTTGAA GGCACCGCGG AGCAAATGCT TAGCTCTCTT
ACACTATTAG CCAAACTTCC TGCGAATACT CGAGTTTTCT GCGCCCATGA ATATACCCTC
TCCAATCTTA AATTTGCTCT AACAGTCGAG CCTAACAATC TAAATTTACA GGCATATATG
CAAAAAGCCA CAGAAATGCG TGCTCAAAAT AGCGCTACAA TTCCCTCAAG TATTGCCTTG
GAGCGAGCTA TCAATCCTTT TTTGCGCGTG GGAGAACAAA GCATTATTGA TAGTATAAAA
CAGCATTTTG ATGATCCCGA TCCTATCAAA CTAGATGAAC TCACTTGTTT TACCCGCCTT
CGGCAGTGGA AAGATATTTT TTAG
|
|---|
| Protein sequence | MLTITAIKAF NDNYIWVLQQ TPHSQVYVVD PGDAKVVIAY LVSHQLALAG ILLTHHHQDH
TGGVGELKRY VEQTSSQTLQ VYGPQKENIA HVNVPLNPEM RTELTLPFLN AQIQVLNVPG
HTAGHIAYFI EDALFCGDTL FSAGCGRLFE GTAEQMLSSL TLLAKLPANT RVFCAHEYTL
SNLKFALTVE PNNLNLQAYM QKATEMRAQN SATIPSSIAL ERAINPFLRV GEQSIIDSIK
QHFDDPDPIK LDELTCFTRL RQWKDIF
|
|---|
| |