| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1773 |
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| Symbol | |
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| ID | 5079232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2018376 |
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| End bp | 2020202 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640498922 |
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| Product | AsmA family protein |
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| Protein accession | YP_001183297 |
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| Protein GI | 146292873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000090206 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA TTAAGTGGTT TTTAGCTATT CTGGTGACAT TAGCCTTGTT AGTCACCCTA
TACCTTACCG TTTTCTTCGA CCCTAATGAT TTTAAACCCG AAATTGTTAA TGCTGTGAAA
AAACAAACGG GGCGTGAACT CGTTATTGCT GATGATCTAT CTTGGACGTT TTTTCCTGCG
CTTGGCATTA ACCTTGGAGG CATTTCATTA TCAAATCCTG AAGGGTTTAC GCCTAAATCA
ATGCTTGATG TGAACAAAGC TGTAGCGGAA GTGGCCTTAA TACCATTGTT TCGTAAAGAG
ATCCAAGTTG CTCAATTAAG TTTGGATGGC GCTAACATTA ACCTAGTGAC TCGTAAAAAT
GGCAGTTCCA GCTTAGATGG GCTAACGGGA ACTGATCCCA GTGTCAAATC TAGCTCCACA
GCTGCGCCTG CTTCCTCTCC AGCCCAACTT GCCAGTGTTG AAGTGGGTGG CGTGTCAATT
ACCAACACAC AAATTAATAT GATTGATGAG ACAAAGGGCG AAACTCAAAC ATTCACTTTA
GACAGTTTGA CTTTAGGTAC ATTTTCTTTA GACAAATTTG CCCCTATTGC TTACGAATTC
ACTGCCACGT TATCCGATAT GAAAATCACC AGTCAAGGTG AAGGTGAACT TAAGCTAAGT
CGTGATTTTA ATCAGTTGGT GATAGAGAAA CTAAAAATCG ACACAGTGGT GGAAGGCAAT
AGTATTCCCA ATCAAAAATT GACTACAGCG TTAAGTGTCA ATACCGAAAT CGCCTTAGAT
AAAAAGCAAC TATTGGCGGA TATAACCCAG TTAAACGCTG CGGATATTAA TGCTTCTGGT
AAGTTAACGG TGAATTATGG AACAAAGGTT CCACAAATTA AGGCTGATTT CCAAGTTGGT
GATATAGATG TCGATAGTCT CTTACCTAAA TCAGAAGCAA CAGCAAATGG CGCTCCAGTA
TCTGCAGGGG CTGAGCAAGC AACGGAGCCG GATCTTAGTG CACTAAAATC ACTCGATCTC
AGTGTTAAAC TGGCGGTGAA ATCAATTAAA GTCGCTAATT TGTCGACCCA AAATTGGTTA
CTCGATCTTG GGGTTAAAAA TGGCATACTC GATCTTAAAC AATTAACGGC TGATTTATAT
CAAGGAAAGT TATTGGTGAG TGCTCAAGTT GATGCTCGCC AAACTGTCGC CAGTTATCAA
TTTGATAAAC AAATAACAGG CGTGCAAATT CAGCCATTAC TGAAGGATGC AGCCGATATT
GACTTGTTAG CAGGGATGGC AAATTTCAAT CTGAAAGGAA GAGGAAAAAG CTTACTTCCA
GAGGCGCTAA AGAAAAATCT ACTCGCTAAT GGTCGTTTTG ATATCACGGA TGGTGCGCTT
TATGGCGTCA ATATTGCGCA GATGATCCGC AGTGCACAAG CTAAGTTAAA AGGTGATTTA
TCGGCTGATA CGAAAGAAGA GCGTAAAACA GACTTTTCGA GTCTGACAGG CACTTTTTCA
TTGGAAAATG GTGTTGCTAC GAATCCTGAT TTATCGATGG CATCTCCATT ATTGCGTCTT
GCGGGTAAAG GGAATGCAAA TTTAATAACA GAGGCCCTCG ATTATCGATT GACGGCTAGC
CTTGTTAACT CATTAAAAGG ACAGGGAGGC AGTGAGAAAG ATGCTCTTGC GGGGGTTGAT
ATTCCATTAG CGATAACTGG CACTTTCCAA AAACCAGAGT ATGCATTGGA TACTCAAGCT
TTATTGAATA ATCAACTGAA GGAAGAAACG GATAAAGCGA AGGAAAAATT GAAAGATTCT
CTGCTGAAAA AGCTTGGGGG TTTATAG
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| Protein sequence | MKLIKWFLAI LVTLALLVTL YLTVFFDPND FKPEIVNAVK KQTGRELVIA DDLSWTFFPA
LGINLGGISL SNPEGFTPKS MLDVNKAVAE VALIPLFRKE IQVAQLSLDG ANINLVTRKN
GSSSLDGLTG TDPSVKSSST AAPASSPAQL ASVEVGGVSI TNTQINMIDE TKGETQTFTL
DSLTLGTFSL DKFAPIAYEF TATLSDMKIT SQGEGELKLS RDFNQLVIEK LKIDTVVEGN
SIPNQKLTTA LSVNTEIALD KKQLLADITQ LNAADINASG KLTVNYGTKV PQIKADFQVG
DIDVDSLLPK SEATANGAPV SAGAEQATEP DLSALKSLDL SVKLAVKSIK VANLSTQNWL
LDLGVKNGIL DLKQLTADLY QGKLLVSAQV DARQTVASYQ FDKQITGVQI QPLLKDAADI
DLLAGMANFN LKGRGKSLLP EALKKNLLAN GRFDITDGAL YGVNIAQMIR SAQAKLKGDL
SADTKEERKT DFSSLTGTFS LENGVATNPD LSMASPLLRL AGKGNANLIT EALDYRLTAS
LVNSLKGQGG SEKDALAGVD IPLAITGTFQ KPEYALDTQA LLNNQLKEET DKAKEKLKDS
LLKKLGGL
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