| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1743 |
|---|
| Symbol | |
|---|
| ID | 5079301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1991160 |
|---|
| End bp | 1992023 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640498892 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183267 |
|---|
| Protein GI | 146292843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCC GCTCGTGCCC ACTATTGATC GCGACACTTG TAAGTGCCCA AGTGCAGGCG
AGTGATTTTA CTGTCGAGTT AGGTGGTTTT TACTCACAAT CTGACACACG CATGGATGTG
ACTAATCCCA TTTCCGGGAG TAATTACACT TTGGATTATG AGTCTGATCT GCAATTAACC
GAAAATAAGT TCTTACCCTT TATTGAATGG AATTATCACT TTAACGAACG TCATAACATC
TACCTAGACT GGAAACAACT TCACCGCAGC GCAGAAACGC AAGCCCTAAG TCAACCCTTT
CAGATTGAAA TTAACGATAC CATTTACGAT ATCAAAATGG GTGGTAAACT TAATTCTACC
CTAAATATCG ATATCCTACG TATCGGTTAT GGTTACGATG TTTTCCAAGG CAGTCACTAC
AATATTGGCC TTTCTATTGG CCTGCACACT ATGTTTATCA AAACAGGATT TGAAGGTGTT
ATTGGCGTTT GTAATGCCTC CGAGTTGTTG AACAATGTTT GTGCAAGCCA AGCAATCCCC
CGTATCGTGG ACGAGAATGT TACTGCGCCA TTACCCAATT TAGGACTCTA TGCAAACTAT
GAATTCATTG CCGGTTGGAA AGTAGCGAGT CATTTCCAAT ACTTCTCTAT CACTCTGAAT
GATATAAAAG GTGAATTGAT AGATATAAAG GTCGGTATCG ACGCACAAAT TACGGCCAAT
TGGCGTATGA GTGTGGCCTA CAACTACTAT AAAGTAGACG TCGATATTGC CCAAAAATCA
GACAGTAAAG ACACAAAAAT TGCTGATTAC AATATTGATT ACAGTTTTAT AGGCCCGATG
CTTTCAGTGA GCTATACCTT TTAA
|
|---|
| Protein sequence | MLIRSCPLLI ATLVSAQVQA SDFTVELGGF YSQSDTRMDV TNPISGSNYT LDYESDLQLT
ENKFLPFIEW NYHFNERHNI YLDWKQLHRS AETQALSQPF QIEINDTIYD IKMGGKLNST
LNIDILRIGY GYDVFQGSHY NIGLSIGLHT MFIKTGFEGV IGVCNASELL NNVCASQAIP
RIVDENVTAP LPNLGLYANY EFIAGWKVAS HFQYFSITLN DIKGELIDIK VGIDAQITAN
WRMSVAYNYY KVDVDIAQKS DSKDTKIADY NIDYSFIGPM LSVSYTF
|
|---|
| |