Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1715 |
Symbol | |
ID | 5079273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1954123 |
End bp | 1955070 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640498864 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001183239 |
Protein GI | 146292815 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCGC TGGATCTTGC GAACTTAGGC TCTACCTCGG TAAGCGCCGT CTCAGATAGC GTCAGCCTGT TCGAGATGGG TCCCCGTGAT GGCTTGCAGA ATGAGGCCGC CGTCCCGACA CAGGCCAAAG TCGCCTTAAT TGAATCCCTT GCCGATGCGG GCGTGAAGCG AATTGAAGCA GGCAGTTTTG TGTCACCCAA ATGGGTACCA CAAATGGCCG ATAGCGGCGA AGTATTGCGC CAAATTCGCC GTCAAGCGGG CGTGGTTTAC AGTGCCCTCA CCCCTAATGT CAAAGGCTTA GAGCTAGCGC TGGATGCAAA AGCTTCCGAA GTCGCTATCT TTGGTGCGGC GTCACAAAGC TTTAGCCAAC GCAATATCAA CTGTTCGATT GAAGAGTCGA TTGAACGCTT TATCCCTTTG ATGGACATGG CAAAAGCCGC CAATATCCCA GTTCGTGGCT ATGTGTCCTG CGTTTTAGGT TGCCCCTATG AAGGAGAAAT TGCGGCGAGC GAAGTGGCAA GAGTGTCTGA AATCCTTTAC AAAATGGGCT GTTACGAAAT TTCGCTCGGT GACACTATCG GTGTAGGCAC GCCGTTAAAA GCCCGTAAAA TGCTGCAAGC CGTGATGGAG CGAGTCCCGG TTGAAAAGCT CGCCCTGCAC TTCCATGACA CCTATGGCCA AGCATTAGCC AATATTACCG CCTGCCTCGA CTTGGGCGTG CGCAGCTTTG ACGCCTCAGT GGCGGGCTTA GGTGGTTGCC CGTATGCGAA AGGCGCGTCG GGCAATCTGG CGAGTGAAGA CTTGGTCTAT ATGCTCCACG GACTCGGTTT GAAGACGGGT ATCGATTTAG AAAAACTGGC ATTAGCGGGT TTTGGGATCA GCAAACAATT AAATCGTCTT AATGGCTCTA AAGTCGCCAA TGCAATCTTG CAGGGCGCCA AAGCCTAG
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Protein sequence | MSALDLANLG STSVSAVSDS VSLFEMGPRD GLQNEAAVPT QAKVALIESL ADAGVKRIEA GSFVSPKWVP QMADSGEVLR QIRRQAGVVY SALTPNVKGL ELALDAKASE VAIFGAASQS FSQRNINCSI EESIERFIPL MDMAKAANIP VRGYVSCVLG CPYEGEIAAS EVARVSEILY KMGCYEISLG DTIGVGTPLK ARKMLQAVME RVPVEKLALH FHDTYGQALA NITACLDLGV RSFDASVAGL GGCPYAKGAS GNLASEDLVY MLHGLGLKTG IDLEKLALAG FGISKQLNRL NGSKVANAIL QGAKA
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