| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1702 |
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| Symbol | |
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| ID | 5079360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1940429 |
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| End bp | 1941313 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498851 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001183226 |
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| Protein GI | 146292802 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000467042 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCTATGA ACAGTGATGG CTCAATAGAT
TTTGCAAGTC TTGAAAGATT AGTCGAATTC CATATAGACC AAGGCACAGA TGCCATTGTG
GCCGTTGGCA CGACCGGCGA GTCAGCGACT CTGCCCATGT CTGAGCATGT TACCGTGGTT
GCACAAACCG TTAAATTTGC TGCAGGCCGC ATTCCTGTTA TTGGTGGTAA TGGCGCCAAT
GCGACAGCGG AAGCCATCGA ACTCACTAAA TCTTTATCTA AAGTGGGTGT CGCAGGTATG
TTAGGTGTAA CACCTTACTA CAACAAACCA ACGCCAAAGG GCTTGATTGC CCACTACAAA
GCCGTAGCTG CGAGCACTGA TATTCCTCAA ATTCTGTATA ACGTACCAGG ACGCACTGCA
GTTGATATGC AGCCAGAAAC GGTCGCAGAA CTCGTCGGTG TGAGCAATAT TATTGGTGTA
AAAGAAGCCA CAGGTGATAT CGCTAGGGTA AAACGTCTGC GGGAATTATG TGGTAATGAT
TTCAAGCTCT ACAGCGGTGA TGACGCAACA GCCAGAGAGT TTTTGCTACT CGGCGGTAAT
GGCGTGATTT CTGTGGCCAA TAACATAGTC CCCAAAGCCT TTAAAGCTAT GTGCGACGCA
GCTCTTGCAG GTAATGCTGA ATTGGCCTTG AGCCTAGATA CGCCACTGCG AGGCTTATAT
AGTACGCTTT TCTGTGAGGC GAACCCGATC CCTGTTAAAT GGGCTGCCCA TCGTATGGGA
TTGATTAAAT GTGGCCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT
CTGTTGATAG ATGCAATGAC TCGTGCCCAG ATAGAGGTTA AATAA
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| Protein sequence | MINGSIVALI TPMNSDGSID FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMSEHVTVV
AQTVKFAAGR IPVIGGNGAN ATAEAIELTK SLSKVGVAGM LGVTPYYNKP TPKGLIAHYK
AVAASTDIPQ ILYNVPGRTA VDMQPETVAE LVGVSNIIGV KEATGDIARV KRLRELCGND
FKLYSGDDAT AREFLLLGGN GVISVANNIV PKAFKAMCDA ALAGNAELAL SLDTPLRGLY
STLFCEANPI PVKWAAHRMG LIKCGHIRLP LTELSEQCHG LLIDAMTRAQ IEVK
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