Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1686 |
Symbol | |
ID | 5079344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1924243 |
End bp | 1926177 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498835 |
Product | putative serine protein kinase, PrkA |
Protein accession | YP_001183210 |
Protein GI | 146292786 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2766] Putative Ser protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000136909 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATTT TCGAGCATTA CCAAAAGCGC TATGAACAAA AACTCGATGA AGAATACACT TTGCAGGAGT TTCTTGAGAT CTGTAAGGAA GATCGCAGCG CTTACATGTC AGCATCAGAG CGGCTACTGC TCGCCATTGG TGACGCTGAA GTTATTGATA CAGCTAAAAA TCCAACACTT AGCCGCATTT TTTCTAATCG TCTAATTTCA CGTTATCCCG CTTTTAAAGA TTTCTTCGGC ATGGAAGATG CCATTGAGCA GATCGTGGCT TATCTTAAGC ACTCAGCCCA AGGCTTAGAA GAATCCAAAC AAATTTTATA TCTACTCGGC CCTGTGGGTG GTGGTAAATC ATCACTTGCA GAAAAGCTCA AATCCTTAAT GCAAAAAGTG CCCATTTATA TATTAAGTGC CAATGGGGTG CGTAGTCCTG TAAATGATCA TCCCTTCTGC CTGTTCGATC CCGATGAAGA TGGACAGTTA TTGAAGGATG AATTTAATAT TCCCACCCGT TATTTAAAAA CCATCATGTC ACCTTGGGCC GTCAAGCGGC TGCACGAATT TGGTGGCGAT ATTTCTAAAT TCCGTGTGGT AAAAGTCTAT CCATCAATTT TAGACCAAAT CGCTATCGCT AAAACGGAAC CTGGGGATGA AAACAACCAA GATATTTCAT CTTTAGTGGG TAAAGTAGAT ATTCGCCAAC TTGAACATTT CTCCCAAGAT GACGCCGATG CCTATGCTTA TTCAGGTGCA TTGTGCCGTG CGAACCAAGG GATGATGGAA TTTGTCGAGA TGTTTAAGGC GCCCATTAAA GTGCTACACC CTCTGCTGAC CGCAACCCAA GAAGGTAACT ATAACGGTAC AGAAGGCTTA TCGGCCCTGC CCTATAGTGG CATTATTCTG GCGCACTCTA ATGAGTCAGA ATGGTCAACC TTTAAAAACA ATAAGAATAA TGAGGCCTTC CTCGACCGAG TGTATATCGT CAAAGTGCCT TATTGCTTAC GGGTTTCAGA AGAACTACAA ATCTACCAAA AATTACTGCT CCACTCTGAG TTATCAAAAG CGCCCTGCGC TCCTGGTACG CTTGAAACAC TCGCGCAATT TAGTGTGTTA TCACGCATTA AAGCGCCAGA AAACTCATCC ATCTACTCTA AAATGCGGGT TTATAATGGC GAAAGTCTGA AAGATACCGA TCCTAAGGCT AAGTCGTACC AAGAATACCG CGATTATGCA GGTGTTGATG AGGGGATGAA TGGTTTATCA ACACGATTTG CATTTAAAAT CCTGTCGCGG GTATTTAACT TTGACCACTC GGAAATCGCC GCCAATCCGG TACATTTGTT CTATGTACTC GAGCGCCAAA TAGAACAAGA ACAGTTCCCA AATGACACGG CTGAGCGTTA TCTCGAGTTT CTAAAAGGCT ACCTAATCCC TAAATATGTC GAATTTATTG GTAAAGAAAT CCAAACCGCT TATTTAGAGT CTTATTCTGA GTACGGTCAA AATATCTTTG ACCGCTATGT CACCTATGCC GACTTTTGGA TCCAAGATCA GGAATACCGC GATCCAGAAA CAGGCCAACT GTTCGACCGC GCCGCCCTTA ATGCAGAGCT TGAAAAAATC GAGAAACCCG CGGGGATCAG TAATCCTAAG GATTTCCGTA ATGAAATCGT CAACTTTGTC CTGCGTGCCC GTGCCAACCA TGAGGGCAAC AATCCCCTCT GGACCAGCTA CGAGAAACTT CGCACTGTGA TCGAGAAGAA AATGTTCTCC AACACAGAAG ATTTACTCCC TGTAATTTCC TTTAATGCCA AAACGTCGAA CGACGATCAA CGTAAACACG ATGATTTTGT CAATCGTATG ATGGAGAAAG GCTATACCAA GAAACAAGTC CGACTCTTGT CTGAGTGGTA TTTACGGGTA CGTAAATCTT CTTAA
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Protein sequence | MGIFEHYQKR YEQKLDEEYT LQEFLEICKE DRSAYMSASE RLLLAIGDAE VIDTAKNPTL SRIFSNRLIS RYPAFKDFFG MEDAIEQIVA YLKHSAQGLE ESKQILYLLG PVGGGKSSLA EKLKSLMQKV PIYILSANGV RSPVNDHPFC LFDPDEDGQL LKDEFNIPTR YLKTIMSPWA VKRLHEFGGD ISKFRVVKVY PSILDQIAIA KTEPGDENNQ DISSLVGKVD IRQLEHFSQD DADAYAYSGA LCRANQGMME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGL SALPYSGIIL AHSNESEWST FKNNKNNEAF LDRVYIVKVP YCLRVSEELQ IYQKLLLHSE LSKAPCAPGT LETLAQFSVL SRIKAPENSS IYSKMRVYNG ESLKDTDPKA KSYQEYRDYA GVDEGMNGLS TRFAFKILSR VFNFDHSEIA ANPVHLFYVL ERQIEQEQFP NDTAERYLEF LKGYLIPKYV EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPETGQLFDR AALNAELEKI EKPAGISNPK DFRNEIVNFV LRARANHEGN NPLWTSYEKL RTVIEKKMFS NTEDLLPVIS FNAKTSNDDQ RKHDDFVNRM MEKGYTKKQV RLLSEWYLRV RKSS
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