Gene Sputcn32_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1685 
Symbol 
ID5079343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1922908 
End bp1924182 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content43% 
IMG OID640498834 
Producthypothetical protein 
Protein accessionYP_001183209 
Protein GI146292785 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000901028 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTATGG CGAACTTTAT CGATAGACGG TTGAATGCGA AAGGAAAAAG CACAGTCAAC 
CGCCAACGCT TTATCAATAG ATATAAGCAG CAAATTAAAA AAGCCGTCAG TGATGCCGTC
ACGCGTCGCA GTGTAACGGA TGTAGATAAA GGCGAAAAAA TCAGTATCCC AACGCGGGAT
ATTAGCGAAC CCATGTTTCA CCAAGGCAAA GGCGGTGTCA GGGACAGAGT GCATCCTGGT
AATGACCAAT TTACCCGTGG CGATAAAATT GACCGACCAC CCGGTGGTGC AGGTGGCGGC
TCAGGGAAAG GTGATGCTTC CGATTCTGGT GAGGGCAACG ATGACTTTGT ATTTGAAATA
TCTAAAGATG AATACTTAGA ATTGCTTTTC GAAGATCTAG AACTTCCTAA CCTACAAAAA
AACCGCCTTA ATAAATTGGT GGAATATCAG GTTTATCGCG CCGGATTTAC CAACGATGGC
GTCCCCGCCA ATATTAATAT TGTCCGCTCC CTACGTTCAT CACTGGCACG CCGTATTGCA
ATGTCGGCCA GTAAAAAGAA GCAATTAGCG GAATTAGAAC AAGAGTTGGC AGAACTTGAG
AATATCCCAG GAACTCAGGC AGAGCGGCTC CTCGATTTAA AGGCTCAAAT AGAGGTACTT
AAACAAAAAA TTGCGAAAGT CCCATTTATC GATACCTTCG ACTTACGTTT TAACAACTTT
AGTAAACGAG AAATTCCATC AAGCCAAGCC GTCATGTTCT GTTTGATGGA TGTGTCTGGT
TCTATGGATC AGGCAACTAA AGATATGGCA AAACGCTTCT ATATCTTGTT ATATCTGTTC
CTTACTCGCA CCTATAAAAA CTTAGAAGTG GTTTACATTC GTCACCATAC TCAAGCCAAA
GAAGTCGATG AACACGAATT CTTCTACTCC CAAGAAACAG GCGGAACGAT TGTTTCAAGT
GCTTTAAAAC TGATGCATGA AATACAGCAG GCACGTTATC CCGCCGATGA ATGGAACATA
TATGCGGCCC AAGCCTCAGA CGGCGATAAC TGGGCAGATG ATTCTCCCAC CTGTCGGCAG
TTATTAGAGC AAAAAATTCT GCCGTTAGTA CGCTACTTTA GTTATATCGA AATCACCAAT
CGCGCCCATC AAACACTGTG GCGAGAATAT GAATCCCTAG AACAACACTA CGACAACATA
GCTGTGCAGC ATATACGTCA AGCCGAAGAT ATTTACCCTG TATTTAGAGA ATTATTTAAG
AAACAGGCGG TTTAA
 
Protein sequence
MRMANFIDRR LNAKGKSTVN RQRFINRYKQ QIKKAVSDAV TRRSVTDVDK GEKISIPTRD 
ISEPMFHQGK GGVRDRVHPG NDQFTRGDKI DRPPGGAGGG SGKGDASDSG EGNDDFVFEI
SKDEYLELLF EDLELPNLQK NRLNKLVEYQ VYRAGFTNDG VPANINIVRS LRSSLARRIA
MSASKKKQLA ELEQELAELE NIPGTQAERL LDLKAQIEVL KQKIAKVPFI DTFDLRFNNF
SKREIPSSQA VMFCLMDVSG SMDQATKDMA KRFYILLYLF LTRTYKNLEV VYIRHHTQAK
EVDEHEFFYS QETGGTIVSS ALKLMHEIQQ ARYPADEWNI YAAQASDGDN WADDSPTCRQ
LLEQKILPLV RYFSYIEITN RAHQTLWREY ESLEQHYDNI AVQHIRQAED IYPVFRELFK
KQAV