Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1684 |
Symbol | |
ID | 5079342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1921381 |
End bp | 1922898 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498833 |
Product | SpoVR family protein |
Protein accession | YP_001183208 |
Protein GI | 146292784 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000208668 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAAAA CGACATCAAG AACACGATTG AGCGATGGTC CAGATTGGAG CTTTGAGCTG CTACAGGATT ATCTCAAAGA AATCGAAAGG GTGGCGGCAA TTTACAAGCT AAACACCTAT CCAAATCAAA TTGAAGTCAT CACCGCCGAA CAAATGATGG ATGCCTACGC AGGAATAGGT ATGCCGATTG GTTATACCCA TTGGTCATTT GGCAAACGCT TTATTGAGAC AGAACAAGGG TACAAACGCG GGCAAATGGG GCTTGCCTAT GAAATTGTGA TTAACTCTAA CCCTTGTATT GCCTATTTAA TGGAAGAAAA TACCATTACG ATGCAAGCAT TAGTGATGGC TCACGCGTGT TTCGGACATA ACAGCTTCTT TAAAAATAAT TATTTATTTA AAACTTGGAC AGATGCCAGC TCAATTATCG ATTATTTGGT TTTTGCCAAA AACTATATTA GCGACTGCGA GCAAAAACAT GGAGCCGAAC AAGTTGAAAG CATTATTGAC TCCTGCCACG CCTTAATGAA TTACGGTGTA GACCGTTATA AACGTCCATC GGAAATCTCT TTTCGAGAGG AACAAGCAAG ACAAAAAGAG CGTGAAGCCT ACCTTCAAAG CCAAGTGAAT GATTTATGGC GTACTATCCC AACTCAGCAA CAGGATTTAT CCCAAACCAA AAAACGACAC TTCCCCTCCG AACCGCAGGA AAACATTCTC TATTTTATCG AAAAAAATGC CCCTCTACTT GAGCCATGGC AAAGGGAAAT CATTCGCATC GTTCGTAAAA TGGCGCAATA TTTTTATCCA CAAAAACAAA CTCAAGTAAT GAATGAAGGC TGGGCAACCT TCTGGCACTA CACGATTTTA AATCACTTAT ACGATGATGG TGTCGTGACC GACCGTTTTA TGATGGAGTT TTTACAAAGC CATACAGGCG TTGTTGCGCA GCCTGAGTAT AACAGCCGCT ATTACAGCGG TATTAACCCC TATGCCCTAG GTTTTGCCAT GTTCACCGAT ATCAGGCGAA TTTGTGAAGC ACCGACCGAT GAAGATAAAG TATGGTTTCC TGATATCGCG GGCAGTAATT GGCTTGAGAC GTTACATTTT GCCATGCAAC ATTTTAAGGA TGAGAGTTTT ATTAGCCAAT ATCTTTCCCC AAAAGTCATT CGCCAATTTA AATTATTTGG CATTCACGAT GATGAAAAAC GCAGTTATCT TTCTGTATCA GCAATTCACG ATGAACAAGG TTACCGTGAT ATTCGTCAAT TACTTTCACA GCAATATAAC TTGTCAAACA TAGAACCTAA TATCCAAGTA CACCATGTTG AAATAAATGG CGATAGATCA TTAACCCTAA GATATGTTCC AAGCAACGAC ATTCCGCTTG CCAATAGCTA TCACGAAGTG TTGAAGCATC TACATCGACT CTGGGGATTT AATGTTACCC TTGAGCAACA AAGTGCCGAT GCCAGCATTA ATGTGTTAGC AACTTGTCCA AACAATACGA CATCCTAA
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Protein sequence | MGKTTSRTRL SDGPDWSFEL LQDYLKEIER VAAIYKLNTY PNQIEVITAE QMMDAYAGIG MPIGYTHWSF GKRFIETEQG YKRGQMGLAY EIVINSNPCI AYLMEENTIT MQALVMAHAC FGHNSFFKNN YLFKTWTDAS SIIDYLVFAK NYISDCEQKH GAEQVESIID SCHALMNYGV DRYKRPSEIS FREEQARQKE REAYLQSQVN DLWRTIPTQQ QDLSQTKKRH FPSEPQENIL YFIEKNAPLL EPWQREIIRI VRKMAQYFYP QKQTQVMNEG WATFWHYTIL NHLYDDGVVT DRFMMEFLQS HTGVVAQPEY NSRYYSGINP YALGFAMFTD IRRICEAPTD EDKVWFPDIA GSNWLETLHF AMQHFKDESF ISQYLSPKVI RQFKLFGIHD DEKRSYLSVS AIHDEQGYRD IRQLLSQQYN LSNIEPNIQV HHVEINGDRS LTLRYVPSND IPLANSYHEV LKHLHRLWGF NVTLEQQSAD ASINVLATCP NNTTS
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