| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1681 |
|---|
| Symbol | |
|---|
| ID | 5079339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1918052 |
|---|
| End bp | 1918618 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498830 |
|---|
| Product | disulfide bond formation protein B |
|---|
| Protein accession | YP_001183205 |
|---|
| Protein GI | 146292781 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1495] Disulfide bond formation protein DsbB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.058826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGG GGCGTTTTTC GTTGATATGG AGCTCACATT TGACAGCACT TACTCGCTTT
GCCCATTCTC GCAGTTCTTG GTTCCTTCTC ACGGGCACCG CTATTGGCTT AGAAGCCGCT
GCACTGTATT TTCAGTATGT GATGAAACTC GATCCCTGTG TCATGTGTAT CTATCAAAGA
TTAGCTGTAT TTGGCATTTT GGTCGCAGGT TTGATAGGAA TGACAGCCCC TAAGTATCGT
CTGATACGAA TATTAGGAGC GAGCTGTTGG GCCGTGAGTG CCACTTGGGG ATTAAAATTA
GCTTTAGCGC TAGTGAATAT GCAAAATAAC CCTTCCCCTT TTGCTACTTG CTCATTTTTA
CCCGAATTTC CAACTTGGAT GCCATTACAC GAATGGTTTC CTGCGGTAAT GTTACCAACA
GGCATGTGTA CCGATTTACC ATGGCGTTTT ATGGATGTCA CCATGGCAGA ATGGATGGTT
GTCGTCTTTA GCACTTTCCT CGTGATTTGG TTACTGTTTA TCGTGCCAAT TCTAAGTGGC
TCCACTAAAC CTTCTCTTTA TAAATAA
|
|---|
| Protein sequence | MIEGRFSLIW SSHLTALTRF AHSRSSWFLL TGTAIGLEAA ALYFQYVMKL DPCVMCIYQR
LAVFGILVAG LIGMTAPKYR LIRILGASCW AVSATWGLKL ALALVNMQNN PSPFATCSFL
PEFPTWMPLH EWFPAVMLPT GMCTDLPWRF MDVTMAEWMV VVFSTFLVIW LLFIVPILSG
STKPSLYK
|
|---|
| |