Gene Sputcn32_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1673 
Symbol 
ID5079331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1906038 
End bp1906832 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID640498822 
Producthypothetical protein 
Protein accessionYP_001183197 
Protein GI146292773 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.095515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGAC GTTGTCACGA AGTGGATTAT GAAATTATCG GCCACAGTAT GCAGTTGGTT 
GAAGTAGAAC TCGATCCAAA TGAAACTGTG ATTGCTGAAG CGGGGGCGAT GAACTACCTA
GAGCAAGATA TTCGTTTTGA AGCCAAAATG GGTGATGGAT CTGAACCCGA ATCCGGCTTT
TTTGGCAAGC TGATGGGGGC GGGTAAAAGG GTGCTAACGG GTGAGAGCAT TTTTATGACT
CACTTTACCA ACCAAGGCAA CCAAAAGCGC AAAGTCGCTT TTGCCGCTCC TTATCCTGGC
ACTATCCTTG CGATTGATTT AGCCGAATAT GGTGGTGAGC TTATCTGTCA GAAGGACAGT
TTTTTAGCGG CGGCTTTAGG CACACGTGTG ACAATGAAAT TTAATCGCCG TTTAGGCACA
GGCTTTTTCG GTGGTGAAGG GTTTATTTTG CAAAGCCTAC AAGGTGATGG CATGACCTTT
ATACACGCTG GTGGCACCTT AGTGAAAAAA GAACTAAAAG GTGAAACCTT AAGAGTCGAC
ACTGGTTGCC TCGTCGGTTT TACACCAGGG ATTGATTACG ATATCGAGCG CGCAGGCTCA
TTAAAGTCTA TGGTCTTTGG CGGTGAAGGC TTATTTTTAG CAACCTTAAA AGGTCACGGA
ACGGTTTGGC TGCAAAGCTT ACCGTTCTCA CGTATGGCTG ATCGTATTAT CGCCCATGCC
CCATCGGCAG GAGGAAGTGA TCGTGGTGAA GGCTCTGTGC TTGGTGGTCT TGGTCGAATG
ATTGACGGAC GTTGA
 
Protein sequence
MSRRCHEVDY EIIGHSMQLV EVELDPNETV IAEAGAMNYL EQDIRFEAKM GDGSEPESGF 
FGKLMGAGKR VLTGESIFMT HFTNQGNQKR KVAFAAPYPG TILAIDLAEY GGELICQKDS
FLAAALGTRV TMKFNRRLGT GFFGGEGFIL QSLQGDGMTF IHAGGTLVKK ELKGETLRVD
TGCLVGFTPG IDYDIERAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA
PSAGGSDRGE GSVLGGLGRM IDGR