Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1669 |
Symbol | |
ID | 5079327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1901668 |
End bp | 1902291 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640498818 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001183193 |
Protein GI | 146292769 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATT TTGCCTTACT CGCTGTGTTT ATCCCGACTT TTTTCTTTGT TTCTATCACG CCTGGCATGT GCATGACACT CGCCATGACG CTAGGTATGA GCATAGGTGT GCGCCGCACC CTATGGATGA TGTTAGGTGA ACTCATTGGC GTAGCATTAG TCGCCACCGC CGCCGTGATG GGGGTTGCCA GTATCATGCT CAACTACCCC GAAGTATTTC AAATCTTTAA GTGGGTTGGC GGCATTTATT TAGGCTATAT CGGCGTACAA ATGTGGCGCG CCCGCGGTAA GATGGCCATA TTAAGCGATG ATGACACCAA CCCCAGAGCC AGCAGTTTCA CCTTGATTTC CCAAGGCTTT ATTACTGCTA TTGCCAATCC TAAAGGTTGG GCATTTATGG TGTCGCTACT GCCGCCTTTT ATCAATGCCG AGCGCGACGT CGCGCCGCAG CTCCTCGCCT TGCTGAGCAT TATTATGGTG ACCGAATTTA CCTCAATGCT CGCCTATGCC AGCGGCGGTA AAACCCTCCG ACTCTTCCTG AGCCGTGGGG ATAATATTCG CTGGTTAAAC CGGATTGCAG GCAGCCTAAT GATAGGTGTA GGAGTTTGGT TAGCCATGAG CTAA
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Protein sequence | MPDFALLAVF IPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMLGELIG VALVATAAVM GVASIMLNYP EVFQIFKWVG GIYLGYIGVQ MWRARGKMAI LSDDDTNPRA SSFTLISQGF ITAIANPKGW AFMVSLLPPF INAERDVAPQ LLALLSIIMV TEFTSMLAYA SGGKTLRLFL SRGDNIRWLN RIAGSLMIGV GVWLAMS
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