Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1592 |
Symbol | asnB |
ID | 5079552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1812741 |
End bp | 1814405 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498725 |
Product | asparagine synthetase B |
Protein accession | YP_001183116 |
Protein GI | 146292692 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.134057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTCAA TCTTTTCGAT TTTAGATATC CAATCTGATG CCAAACAACT GCGCCAAGTC GCGCTAGAAA TGTCTAAGCT TATGCGCCAT CGTGGCCCTG ACTGGTCAGG TATTTATGCC AGCGATAAAG CGATTCTTGC CCATGAGCGT TTAGCGATTG TTGACATTGA ACACGGTGCC CAGCCGCTGC TGACTGAAGA TGGCAGTTTG ATCCTCGCGG TCAACGGCGA AATCTATAAC CACAAAGAAT TGAAAGCCCA GTTAGGCGAT AAGTACAGCT ATCAAACCAA CTCTGACTGC GAAGTGATCT TGGCGCTGTA TCAAGAATAC GGCACTGAAT TTCTAGATAA ATTAAACGGT ATCTTCGCCT TTGTGTTATA TGACAAAGCT CAAGATAGTT ACCTTATCGG CCGCGATCAC ATGGGTATCA TCCCACTATA CACAGGCCGT GACGCTGCGG GTAACTTCTA TGTTGCCTCA GAGATGAAAG CCTTGATGCC AGTGTGTAAA ACCGTAGAAG AATTCCAACC TGGCCAATAT TTTTATTCAA AGGATGGTGA AGCCGTTAAA TACTATAGCC GAGATTGGCA AAGCTATGAT GCAGTTAAAG ATAATCCAGC CAGCCAAGAA GAATTGCGTG ACGCATTAGA AGCGGCGGTC AAACGTCAAT TAATGTCAGA TGTGCCCTAT GGTGTGTTGC TGTCAGGCGG CTTAGATTCA TCGATCATTT CCGCCATCAC CCAAACCTTT GCTAAGCGCA GAATTGAAGA TGATGGTGAG ACCAACGCTT GGTGGCCACA GTTGCATTCC TTTGCCGTCG GTCTAAAAGG TGCGCCCGAT CTTATCGCCG CCAAAAAAGT CGCCGATGCC ATTGGTACGA TTCACCATGA GATCCATTTC ACCTTCCAAG AAGGCTTAGA TGCGATTAAA GAAGTGATCT ATCACTTAGA AACCTACGAT GTCACCACCA TACGTGCTGC CACGCCAATG TATTTAATGG CGCGTAAAAT CAAAGCTATG GGCATTAAAA TGGTGTTATC GGGCGAAGGT GCTGACGAGT TATTTGGCGG CTATTTATAC TTCCATAAAG CGCCAAACGC ACAGGCATTC CACGAGGAAT TAGTGCGCAA ACTCGATAAA CTGCATCTGT TCGATTGTCT GCGTGCCAAC AAAGCCATGG CCGCTTGGGG ATTAGAAGCT CGCGTGCCCT TCCTCGATAA AGAGTTTATG GATGTGGCAA TGCGTATCAA CCCTGAAGCG AAAATGTCTA AGGATGGCCG TATTGAGAAA CACATTCTGC GTAAAGCCTT TGAGCATAAA TTGCCAAAAG AAGTGGCGTG GCGTCAGAAG GAACAATTCA GTGACGGCGT GGGCTACTCT TGGATTGACG GTTTGAAAGA ACAAGCGGCG GCGCAGGTCG ATGATTTGCA ACTGGCGAAT GCGAAATTCC GCTTCCCCTA TAACACGCCA GAAACCAAAG AGGCGTACTT CTATCGCTGC TTCTTTGAGG AACATTATCC ACTGAGCGGC GCTGCTGAAA CGGTTCCAGG CGGTAAATCC GTCGCCTGTT CAACACCAGA AGCACTAGCT TGGGACGAAA GCTTACGCGG CATTATCGAC CCATCGGGCC GAGCAGTACG CTCAGTGCAT ACCGCAAGTT ATTAA
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Protein sequence | MCSIFSILDI QSDAKQLRQV ALEMSKLMRH RGPDWSGIYA SDKAILAHER LAIVDIEHGA QPLLTEDGSL ILAVNGEIYN HKELKAQLGD KYSYQTNSDC EVILALYQEY GTEFLDKLNG IFAFVLYDKA QDSYLIGRDH MGIIPLYTGR DAAGNFYVAS EMKALMPVCK TVEEFQPGQY FYSKDGEAVK YYSRDWQSYD AVKDNPASQE ELRDALEAAV KRQLMSDVPY GVLLSGGLDS SIISAITQTF AKRRIEDDGE TNAWWPQLHS FAVGLKGAPD LIAAKKVADA IGTIHHEIHF TFQEGLDAIK EVIYHLETYD VTTIRAATPM YLMARKIKAM GIKMVLSGEG ADELFGGYLY FHKAPNAQAF HEELVRKLDK LHLFDCLRAN KAMAAWGLEA RVPFLDKEFM DVAMRINPEA KMSKDGRIEK HILRKAFEHK LPKEVAWRQK EQFSDGVGYS WIDGLKEQAA AQVDDLQLAN AKFRFPYNTP ETKEAYFYRC FFEEHYPLSG AAETVPGGKS VACSTPEALA WDESLRGIID PSGRAVRSVH TASY
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