| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1575 |
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| Symbol | |
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| ID | 5079535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1795230 |
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| End bp | 1795946 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498708 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001183099 |
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| Protein GI | 146292675 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000310395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAA AGCAATACGA TTTAGTGATT TTCGATTGGG ATGGCACTCT GATGGATTCC
ATCGGTAAAA TTATCACGTG TATTGAAAAC ATGGCTAAGG CATTACAGTT ACCTATCCCA
ACTGAAAGTG ACATTCGCGA TATTATTGGT CTTTCTATGA CAGAAGCGCT GCGAGTCCTG
TTTCCTCGGG GGGACAATCT CAGCACTTCT TTAGCATCTT CTTTGTGTCC GCACGCTAAA
AATGAGTTAA GCCAAGGCGA AGATGATGAA TATCAGCAAA TGCGCGCCGA GTTTAAAGCA
CAATATTTGC ATTTAGATAC CACGCCAACG CCACTCTTTG CACAAGCGCC CATTTTAATC
GATGACCTAC ATACTCAAGG TTATCAATTA GCCGTTGCAA CTGGTAAGGC CCGTGCGGGA
CTTAACCGTG TCTTTGAGCA AACAGGCTTA GGTCGATACT TTGTTGCGTC ACGCTGCGCC
GATGAAGTAC GCAGCAAACC CCATCCTGAA ATGATCTCAA GCTTACTTCA AGAGTTGAAT
ATTGCACCGA ACAGAGCTTT GATGGTGGGT GATTCATTGC TAGATTTGAC TATGGCGGCC
AATGCAGGGA TTGATAGCGT TGGTGTCACC TATGGCGCCC ACAGTGCCGA AAAGTTGCTG
CGGGCAAAAC CTATCGCCTT GATTGATTCA CCAAAGCAAT TACTGCAATA CCTCTAA
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| Protein sequence | MKIKQYDLVI FDWDGTLMDS IGKIITCIEN MAKALQLPIP TESDIRDIIG LSMTEALRVL
FPRGDNLSTS LASSLCPHAK NELSQGEDDE YQQMRAEFKA QYLHLDTTPT PLFAQAPILI
DDLHTQGYQL AVATGKARAG LNRVFEQTGL GRYFVASRCA DEVRSKPHPE MISSLLQELN
IAPNRALMVG DSLLDLTMAA NAGIDSVGVT YGAHSAEKLL RAKPIALIDS PKQLLQYL
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