| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1573 |
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| Symbol | |
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| ID | 5079533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1790320 |
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| End bp | 1793706 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498706 |
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| Product | ribonuclease |
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| Protein accession | YP_001183097 |
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| Protein GI | 146292673 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGAA ACGTGATGTT TGATGACCTC TATTTAAAGA AGAATGACGT CATCATGAAA
CGTATGTTAA TCAATGCAAC TCAATCAGAA GAGTTGCGTG TTGCCCTTGT TGATGGGCAA
CAACTGTATG ATCTAGACAT TGAAAGCCCT GGTCATGAGC AAAAAAAATC AAACATTTAC
AAAGGTAAAA TTACCCGCGT AGAACCCTCT TTAGAAGCCG CTTTCGTCGA CTATGGCGCC
GATCGTCACG GCTTTTTGCC ACTAAAAGAA ATCGCCAGAG AGTATTTCCC TAAGGGTTAT
TCCTTCCAAG GCCGCCCCAA CATCAAAGAA GTCGTCAGTG AAGGGCAAGA AGTAATTGTC
CAAATTGACA AAGAAGAACG TGGTAATAAA GGTGCAGCCT TAACTACATT CATCAGCTTA
GCGGGCTCTT ACTTAGTATT AATGCCAAAC AACCCTCGTG CAGGCGGAAT TTCTCGTCGC
ATTGAAGGTG ATGAGCGCAC TGAGTTAAAA GAAGCGATGG CTGATTTGGA AGTGCCTGCT
GGTATGGGGC TGATTGTACG TACTGCGGGT GTAGGCAAAG AATCTGCCGA GTTAAAGTGG
GACTTAAAAG TACTCCAACA TCACTGGGCT GCCATCACTG AAGCGGCCCA AACCAAAGGC
GCACCTTTCT TAATTCATCA AGAAAGCAAT GTGATTGTAC GTGCGATCCG TGACTATTTG
CGTCGTGATG TAGGCGAAAT TCTCATCGAT CATCCCCGTA TTTATGAGGA AGCTAAGCAA
CATATTTCCT TAGTTCGTCC TGATTTTGTT GAGCGAGTAA AACTTTACGA AGCTGAAGTA
CCGTTATTCA CTCACTTCCA AATTGAGTCT CAAATCGAAT CTGCCTTCCA GCGAGAAGTC
CGTTTACCTT CTGGTGGTTC GATAGTTATC GACCCAACTG AAGCCTTGAC ATCTATCGAT
ATTAACTCTG CCCGCGCAAC TAAAGGCGGC GATATTGAAG AGACTGCGCT TAACACCAAC
CTCGAGGCTG CCGATGAAAT TGCTCGCCAA TTACGTCTAC GCGATTTAGG TGGCTTAGTG
GTTATCGACT TTATCGATAT GACGCCTGTG CGCCATCAGC GTGAAGTTGA AAACCGCTTA
CGTGACGCCG TTCACCACGA CCGCGCCCGA GTGCAGTTAG GCCGTATTTC TCGTTTCGGT
TTAATGGAAA TGTCGCGTCA GCGCCTGCGT CCCTCTTTAG AAGAATCGGC GGCGCATATC
TGCCCTCGCT GTCATGGCCA AGGCACGATT CGCAGTACTG AGTCTTTAGC ACTGTCAATT
TTACGTTTGA TGGAAGAAGA AGCCATCAAA GAAAACACCT CACAAATCGA AGCGATTGTG
CCTGTGGATG TTGCAGCTTT CTTGTTAAAC GAGAAACGCA AAGCTATTCG CATCACAGAA
CAACGTCACG ATGTCGAAGT ATATGTAATT CCTGATGCGC ACATGATGAC GCCAGATTAT
CGTGTGATCC GTCACCGTAG TGACGACGAA ATTAGCGAAT CTAGCTATAA ACGTATCGAA
CATCCAGAAG CTAAATTGTA TGAGCCACGT AAACTGGAAC GTACTGCTGC GCCAACGCCT
GCTTTAAAAG GTTTCGCTGC GCCACAAAAA GTGGAACAAG CACCATCACC AACGGTGAAA
ATAGAAGCGC CACAACCAAG TTTCTTTAGC AAGCTGATAG GCACCATCAC AGCATTATTT
GCATCAAGTG ATAAAGCTGA ACCCGCAAAA ACAACGGAAA CCAAAAATAC TGATACTAAT
GCGGCTAATG CAAATCGCCG TAACCGCCGT ACAGACACCC GTCGCCCTCG AAATAGTCAA
GACGCTGATA AAGCGAAAGA AGGCAACCGT GAGCCACGTA ATCGCAATGC GAAGAAAACT
GCCGAACCAG TAGCGGTAGC AACTCAAGAA CGTGCAGTTC GCGAGAAAGA AGACTCGGCA
AAACGTCCTG CGAAAGTGGA AACTAAACCT CGTGTTCAAG CTCCAAAAGA AGTCATTGCA
GATCTAGAGG CCGATGCACC GAAGCAAGAA GTTGCCCGCG AACGCCGTCA ACGTAGAAAT
ATGCGTCGCA AAGTCCGTAT CGATAATGGC AATAACACGC CAGATAACGC GATCCCAATT
GCACCAGAGG AAGCCGCAGA AGTACTCGCG GAAATTGCAG CCATTAACGC CGCGGCAAGT
ATTGATGCTA AAGCCGAGGT AGCTGCCGAA GCGCCGACTA TTGAACCCAA AGCACCAAGA
GCTCGTCGCC AACCGCGTAA AGAAGCTATC CCCGCTCAAG CTACGCTAGA AGCGGTAGCC
GAAGAAGGTA CTCCTGTTGA AACAGCACCA ATAGAGACCG CTTCCGTTGA TGTTGTGGAA
ATACCTGTAA CTGTCACTGC AGACACTTCA GAAATGGCTG AACCTCTTGT CGTATCTCAA
CATAACGAAG CTGAAAGTGC TGAAGATGAG AACACTAGTG CAGATGAGCA ATCAAAACGC
GAACAAAGAG ATGGTCAACG TCGTAGCCGC CGTAGTCCAC GTCATCTTCG CGCTGCTGGC
CAACGTCGTC GTCGTGATGA AGATGATCAA GGCGTCTCAG CACCAGCCCA GTTCGTTCCT
AACGACGAAT TAGGCGCAGA TCAAGAGTAC CCAACTGAAG TCACTCACAG CGCACACATT
ACGGGTCCAA GTTCAGCCCC AACTGTTGAA GCCGTAAAAG CAGAAACAGT TGAGCAAGCA
GTGACAGAAG TTGTCGCTGT AGTGGAATAC GTCGCTCCAG TTACAGCACC AGTATCTACT
ACAGAAATAG AAAAGATTGC TATTGCAGAC GCTCCTGTGG CAGAAACACC TGTCATTCAA
AAAGTGGCTG CCGAAGCAAC AATCACTCCT GTTGTGCCTG AAACCACTGA AACTCAAGTG
CTAGAGCCAA AAATCGAAGA AACCAAAGCA GAGACAGTTG AAGATATTGC TGAGGCCAAA
ACAGAACCAC AAGTCGTTTT ACAACCCGCC TCAGTGGTTA AAGCAACCGT TGTACAAGAT
ATCACTAAAG TACCAACTAA AGCAGTTGCA TCTGCACCAA TGACAAAACC AGCAGCCATT
GTTAAACCAC AACCCAAGGT TCAAACAGAG GCCACCAATG TCAATTCACA AGCGGCTGAT
GTTACTGATG CAGTTGTAAG CAAACCTAAA ACAACAAGTC GTTTTGGGGC TATGGTATCG
TCGGATATGA CTAAACCTGT CGTTGAGGTG AGAACGCAAG TTGAAGTGCC AAAAGGACGC
GAGTATGACA ATACTCCGAG CGAGGATACC TCTGCACCTA AGGTAAAACT AGCGAACAGC
GCGGAATCGG ATATGGCTCG CCCATAA
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| Protein sequence | MQRNVMFDDL YLKKNDVIMK RMLINATQSE ELRVALVDGQ QLYDLDIESP GHEQKKSNIY
KGKITRVEPS LEAAFVDYGA DRHGFLPLKE IAREYFPKGY SFQGRPNIKE VVSEGQEVIV
QIDKEERGNK GAALTTFISL AGSYLVLMPN NPRAGGISRR IEGDERTELK EAMADLEVPA
GMGLIVRTAG VGKESAELKW DLKVLQHHWA AITEAAQTKG APFLIHQESN VIVRAIRDYL
RRDVGEILID HPRIYEEAKQ HISLVRPDFV ERVKLYEAEV PLFTHFQIES QIESAFQREV
RLPSGGSIVI DPTEALTSID INSARATKGG DIEETALNTN LEAADEIARQ LRLRDLGGLV
VIDFIDMTPV RHQREVENRL RDAVHHDRAR VQLGRISRFG LMEMSRQRLR PSLEESAAHI
CPRCHGQGTI RSTESLALSI LRLMEEEAIK ENTSQIEAIV PVDVAAFLLN EKRKAIRITE
QRHDVEVYVI PDAHMMTPDY RVIRHRSDDE ISESSYKRIE HPEAKLYEPR KLERTAAPTP
ALKGFAAPQK VEQAPSPTVK IEAPQPSFFS KLIGTITALF ASSDKAEPAK TTETKNTDTN
AANANRRNRR TDTRRPRNSQ DADKAKEGNR EPRNRNAKKT AEPVAVATQE RAVREKEDSA
KRPAKVETKP RVQAPKEVIA DLEADAPKQE VARERRQRRN MRRKVRIDNG NNTPDNAIPI
APEEAAEVLA EIAAINAAAS IDAKAEVAAE APTIEPKAPR ARRQPRKEAI PAQATLEAVA
EEGTPVETAP IETASVDVVE IPVTVTADTS EMAEPLVVSQ HNEAESAEDE NTSADEQSKR
EQRDGQRRSR RSPRHLRAAG QRRRRDEDDQ GVSAPAQFVP NDELGADQEY PTEVTHSAHI
TGPSSAPTVE AVKAETVEQA VTEVVAVVEY VAPVTAPVST TEIEKIAIAD APVAETPVIQ
KVAAEATITP VVPETTETQV LEPKIEETKA ETVEDIAEAK TEPQVVLQPA SVVKATVVQD
ITKVPTKAVA SAPMTKPAAI VKPQPKVQTE ATNVNSQAAD VTDAVVSKPK TTSRFGAMVS
SDMTKPVVEV RTQVEVPKGR EYDNTPSEDT SAPKVKLANS AESDMARP
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