Gene Sputcn32_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1519 
Symbol 
ID5079578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1737250 
End bp1737777 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID640498652 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001183043 
Protein GI146292619 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTAT ACCTGATGGA CATTTGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC 
GACGTCCTCT GGTTAGTTGC GGCTGTACTG TTCTTAATGT GGGCATTGAT GCTTGAGCGC
TATTGGTATC TAAACTGGAT ATCACCAAAG CAACATAAAG CAATCATCGC TGCATGGAAT
GCGAGAGAGG AAACGACCTC TTGGTACTCA CACCGTATCC GTGAAGCTTG GATGTCCCAA
GCAAAACAAG ATTTGAATGC ACGTATGCTG ATTATAAAAA CCTTAGTAGC GATTTGTCCT
ATGATCGGTT TGTTAGGTAC TGTAACAGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT
CAGGGGACGA GTAATGCTCG TTTAATGGCG GCTGGTATTT CAATGGCAAC AATGCCCACC
ATGGCGGGGA TGGTTGCAGC ATTATCGGGA GTATTTTTTA GTACTCGTCT TGATGCAAAA
ATGAAAATCA GTTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
 
Protein sequence
MMLYLMDIWD SVRGFMASGG DVLWLVAAVL FLMWALMLER YWYLNWISPK QHKAIIAAWN 
AREETTSWYS HRIREAWMSQ AKQDLNARML IIKTLVAICP MIGLLGTVTG MISVFDVMAV
QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH