| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1507 |
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| Symbol | |
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| ID | 5079565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1720141 |
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| End bp | 1721334 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640498639 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001183031 |
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| Protein GI | 146292607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATG AGTCAGGCAA GATGTGGAAA GCTGCAACAC AGGTTATTCA TGGCGGCCAT
GAGCATGAGG CCTTTGGCGC CTTAGTGACG CCGCTTTATC AAAGTGCGAC TTTTGTGTTT
GAGTCTGCAC AGCAAGGTGG CGAGCGATTT GCGGGTAATG AGCCGGGGTA TATTTACACG
CGCTTAGGGA ATCCGACAAC CGCCGAGCTT GAACGTAAAA TGGCGATTTT AGAAGGGGCA
GAGGCCGCCG CCGCGACCGC TTCTGGCATG GGCGCAGTAT CCACCGCATT ACTGGCTAAC
TTGCAGATGG GCGATCACTT AGTGGCATCC AATGCGGTAT ACGGCTGTAC TTTTGCGCTA
ATGACGTCTC AGTTCGCCCG CTTTGGTATC GAAGTGTCCC TAGTGGACTT TTCATCGGCA
GCAGAAATAG AAGCGGCGAT TAAATCCAAT ACTAAGGTCA TTTTCTGTGA AACCCCAGTC
AACCCCCATT TACAGGTGTT TGATTTGGCG GCAATTGCGA CTATTGCCAA ACGTCATAAG
CTAGTGAGTA TTGTCGACAA TACCTTTATG ACGCCATTAC TGCAAAGACC TCTCGATTTC
GGTATAGATA TGGTGATCCA CAGTGCGACT AAATATCTGA ATGGCCATGG TGATGTGATT
GCGGGAATAG TGTGTGGCAG TGACGAACAG ATCCATAGAG TGAAGTATGA AATCTTAAAA
GATATTGGCG CGGTAATATC GCCACACGAT GCTTGGCTGA TCTTGCGTGG TCTTAAAACC
TTAGATGTGC GTTTACAGCG ACATTGCGAT AGTGCTCAGC GTGTGGCGGA GTTTTTGGCG
GAACATCCAA GCATTACACG CGTGTATTAT CCCGGGCTTG CCTCTCATCA AGGGCATAAA
TTTATGGGTA AGCAGATGAA ACGTGCTGGT GGTGTTATCG CGTTTGAACT GGCGGCAAAT
TTAGAAGAGG CCATGGCCTT TGTCGGATAT CTAAAGTTGT TCTCTATTGC GGTGAGCCTA
GGGGATGCTG AATCTCTTAT TCAACATCCA GCATCGATGA CGCATTCACC TTATACGCCA
GAGGCAAGGG CTGCCGCTGG AATTGGTGAT AATCTGCTGC GGATCTCTAT CGGCTTAGAG
GATTGTGACG ACATCATCGC CGATTTGAAT CAAGCACTAG TGCGTTTGAC TTAA
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| Protein sequence | MQDESGKMWK AATQVIHGGH EHEAFGALVT PLYQSATFVF ESAQQGGERF AGNEPGYIYT
RLGNPTTAEL ERKMAILEGA EAAAATASGM GAVSTALLAN LQMGDHLVAS NAVYGCTFAL
MTSQFARFGI EVSLVDFSSA AEIEAAIKSN TKVIFCETPV NPHLQVFDLA AIATIAKRHK
LVSIVDNTFM TPLLQRPLDF GIDMVIHSAT KYLNGHGDVI AGIVCGSDEQ IHRVKYEILK
DIGAVISPHD AWLILRGLKT LDVRLQRHCD SAQRVAEFLA EHPSITRVYY PGLASHQGHK
FMGKQMKRAG GVIAFELAAN LEEAMAFVGY LKLFSIAVSL GDAESLIQHP ASMTHSPYTP
EARAAAGIGD NLLRISIGLE DCDDIIADLN QALVRLT
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