| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1504 |
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| Symbol | |
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| ID | 5079562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1716628 |
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| End bp | 1717014 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498636 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001183028 |
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| Protein GI | 146292604 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGGAT CTAATGGTCG TACTTTGTAC CGCATTCCCC AGTCAGGCAA AATAGCGGGT
GTATGTGCAG GGATTGCCGA GTACTTTGCG ATTGAAACTT GGTTAGTGCG AGTACTGGCG
GTGTCTATCT TCTTACTCGG CGGTTCAGGT GTGGTATTTA TCATCTATGT CGCTTTGTGG
GTGATTTTAG ACATCAAGCC GCAGAAGCAT TACGATAGAG ACGATATCGA GGTGAAGAAG
AAGCCGTGGC AGTCGGGAGA ACCCGCAAAG CAAGCATTGA GCGACGTGAG TCGTCAATTT
CGAAGCCTTG AAGTTAGATT ACAAAACCTA GAACGTCATG TCACCTCTGA CAACTTTGAT
TTGAAAAGAC AAATCAATAG TTTGTAA
|
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| Protein sequence | MRGSNGRTLY RIPQSGKIAG VCAGIAEYFA IETWLVRVLA VSIFLLGGSG VVFIIYVALW
VILDIKPQKH YDRDDIEVKK KPWQSGEPAK QALSDVSRQF RSLEVRLQNL ERHVTSDNFD
LKRQINSL
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