| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1500 |
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| Symbol | |
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| ID | 5079558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1712740 |
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| End bp | 1714365 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498632 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001183024 |
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| Protein GI | 146292600 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGC TAATTAGACG CCTATGCCTG ACAACGGCAG TTTCCTGCAT GAGTTGGTTG
ATGGTTGCAT GTGGCCCCCA ACAGATCCCT TCTGGTTTGG TTTATTGCTC CGAAGGGAAC
CCCGAGTCTT TTAATCCGCA GTTGGTGACT TCGGGTACGA CTATCGACGC GACATCCCAT
CAAATCTACA GCCGATTAGT GGATTATGAT ACTCAGTCAG GCAATCTTGT TCCGGCATTG
GCGACCAGTT GGTCTATGTC AGAGGATGGC TTAAGTTATC GTTTTAAGTT AAGGGAAGGA
GTTCAATTTC AGCATTCGTC GCGCTTTACG CCTTCTCGCC CATTTAACGC CGATGATGTG
TTATTTTCTT TTAATCGGAT CATCAATACA CAGCATCCTT ACCATTGGGT GTCCCGTACT
GGCTATCCCT TCTTTCAAAG CATTGGATTT TCGGAACAAG TTAAGCTAAT AGAAAAAGTA
AACGACCACG AAATCATATT TTATTTAGCC CGTAAAGACG CTTCTTTTTT ATCTAATCTT
GCCACTGACT TTGCCGTAAT TTTGTCCGAT GAGTACGCTC AGCAGCAACT GGCGCTCGGG
CATCCAGAGA ATGTCGATCA TTACGCCATT GGTACCGGAC CTTTTACACT AGTTAAGTAC
GTTAAAAATG AATATATTCG CTATCGCCGT AACCCCGACT TTTGGGGCGA ACCTGCAAAA
GTCGATATGC TGGTATTTGA TATCACGCCC AAAAGCACTG TGCGCCTAGC AAAACTTATC
GCCGGTGATT GCAGTGTTTC AGCTCTACCT AAGGCAGGAG AATTACCTGT CATTGGACAA
CATAAAGAGT TAAATATTGA ATCTCAACCT GGTCTTAATG TGGCATTTTG GGCTTTTAAT
ACGCTAAAAC CACCACTCGA TGACGTACGT GTGCGCAGCG CGCTAGCTCA TGCTGTTGAT
AAGCAACATA TTCTGCGAGC GGTTTATCAA AACACCGCTG TTGAAGCCAT AGGTGTTTTA
CCACCAGCAT CTTGGGCCTA CGACAATAAC AAAGGACTTA TTGATTACAA TCCACAAAAA
GCACGGGATT TATTGAAAGA GGCAGGCATA AAAAACCTCA GTATTGATAT CTGGGCAATG
CCAGTTGCAC GTGCTTATAA CCCTAATACA CTTAAAACAG CAGAGTTAAT TCAGTCAGAC
TTAGCCAATG TTGGGGTTAA AGTAAACATC ATCAGTTACG ACTGGAGCGT CTTTAGCCAA
CGATTGAGCC GCGATGAGTA TGATTCGGTA TTAATTGGAT GGAACGCTGA CAACAGCGAT
CCAGATAACT TTTTCACCCC ATTACTGAGC TGCTCGGCAA TGTTGTCGAA CAACAATCGC
TCCCGCTGGT GTAACCCTGA ATTTGATACC ATCCTAGCAA GAGCAAAAGA TGTATCAACT
CAAGCTGAGC GCAAAGTGAT TTATCAGCAA GCTGAAGCCT TTTTAGCGGA ACAGATACCT
ATGCTAAGTT TGGCTCATGC TAAACGTGTA GCATTAACTC GTCACGATAT TACAGGCATG
CAATTAACTC CCTTTGGTGG GATATCTTTT GCACATACTG GCCTAATCCA ACCGGAGACA
AATTGA
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| Protein sequence | MSVLIRRLCL TTAVSCMSWL MVACGPQQIP SGLVYCSEGN PESFNPQLVT SGTTIDATSH
QIYSRLVDYD TQSGNLVPAL ATSWSMSEDG LSYRFKLREG VQFQHSSRFT PSRPFNADDV
LFSFNRIINT QHPYHWVSRT GYPFFQSIGF SEQVKLIEKV NDHEIIFYLA RKDASFLSNL
ATDFAVILSD EYAQQQLALG HPENVDHYAI GTGPFTLVKY VKNEYIRYRR NPDFWGEPAK
VDMLVFDITP KSTVRLAKLI AGDCSVSALP KAGELPVIGQ HKELNIESQP GLNVAFWAFN
TLKPPLDDVR VRSALAHAVD KQHILRAVYQ NTAVEAIGVL PPASWAYDNN KGLIDYNPQK
ARDLLKEAGI KNLSIDIWAM PVARAYNPNT LKTAELIQSD LANVGVKVNI ISYDWSVFSQ
RLSRDEYDSV LIGWNADNSD PDNFFTPLLS CSAMLSNNNR SRWCNPEFDT ILARAKDVST
QAERKVIYQQ AEAFLAEQIP MLSLAHAKRV ALTRHDITGM QLTPFGGISF AHTGLIQPET
N
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