| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1497 |
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| Symbol | |
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| ID | 5079652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1709821 |
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| End bp | 1710828 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498629 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001183021 |
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| Protein GI | 146292597 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAC TCGACGTACG AAATCTCACG ATTGAACTCG ATACGCCCCA CGGTAGAGTG
CGGGCACTCG AAAAAGTCAG CTTGACCCTG AATGCCGGAG AAATCCATGG ATTAGTAGGC
GAATCGGGTT CAGGTCGTAG CCTTCTCGCC AGGGCCATTC TTGGCATTCC AGGTCCTAAC
TGGACGATTA CTGCCGATCG TATGATGTGG GACGGTAATA ATCTGATGGC CATGACAGCT
AAAGAGCGCC GGAATTTGAT GGGGTCGGAT ATGGCGATGA TTTTCCAAGA TCCCTCCGGT
AGCCTTGATC CTGCACAAAC TGTCGGCAGT CAATTAATGC AAGCTATGCC AAAGAATCCT
AAGCACTATT TCTGGCAACG CCATAAACAT GCACGATTGA CGGCACAAAA ATGGCTACAT
AAGGTAGGTA TCAAAAATCC ACAAAAAGTC ATGTCTAGCT ATGCATGGGA GCTATCAGAA
GGTGAATGCC AAAAGGTGAT GATTGCGATG GCTGTCGCCA ATCAGCCACG GTTATTGATT
GCAGATGAAC CGACAAACTC GATGGAACTT AGCACTCAAG CCCAAATTTT TCGGTTATTA
TCACAGTTAA ATCAACTGCA AAATGTGTCA ATTTTAATCA TTAGCCACGA ACTTGAAACT
CTAGCACAAT GGTGCGATCA CTTATCCGTA CTCTATTGCG GGCAAGTGAT GGAATCAGGG
CCAACTGAAG ATCTCATCAC CCAGCCCTTT CATCCTTATA CCAAAGCACT ACTCGATAAT
ATGCCTGACT ATTCAGGTAT TGTGGCCCAT AAGGCTATTA TGCCGACATT ACCAGGTTCA
GCTCCTGCAC TACAGCATCT TCCAATTGGT TGTCGCTTAG GACCTCGGTG CCCTGAAGCA
CAGAAGAAAT GTGTGAATCA GCCTAATTTA AGTCACCTTA AAGACCGCTA TTTTGCTTGC
CACTTTCCTT ATCACGGCGA AACAACAAAT GACGACCCCA CTGCTTAA
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| Protein sequence | MPLLDVRNLT IELDTPHGRV RALEKVSLTL NAGEIHGLVG ESGSGRSLLA RAILGIPGPN
WTITADRMMW DGNNLMAMTA KERRNLMGSD MAMIFQDPSG SLDPAQTVGS QLMQAMPKNP
KHYFWQRHKH ARLTAQKWLH KVGIKNPQKV MSSYAWELSE GECQKVMIAM AVANQPRLLI
ADEPTNSMEL STQAQIFRLL SQLNQLQNVS ILIISHELET LAQWCDHLSV LYCGQVMESG
PTEDLITQPF HPYTKALLDN MPDYSGIVAH KAIMPTLPGS APALQHLPIG CRLGPRCPEA
QKKCVNQPNL SHLKDRYFAC HFPYHGETTN DDPTA
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