| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1473 |
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| Symbol | |
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| ID | 5079625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1676088 |
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| End bp | 1677329 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498602 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001182997 |
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| Protein GI | 146292573 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTTC TCGATTCAGC CATAGCCAAA CAAATTGTCA GTCGCACCAT GAAAATCATT
GGTCACAATA TCAATGTGAT GAATGGCCAA GGGATGATAT TAGGCTCAGG GGATCCTAAG
CGAATAGGTT CCATCCACGA AGGTGCACTA TTGGCAATTG CCCAAAATCG CAATGTCGAG
ATAAGCCAAG AGGTCGCAGC AAGTCTGCAT GGTGTCAAAC CCGGTATCAA TTTACCTTTG
CATTATCAAG GACAAATTAT AGGTGTTGTC GGTATAACAG GCGATCCTAA CGAGCTAACC
CATTACGGCG AATTACTCAA AATGACCGCC GAAATGATTG TTGAGCAAGC CAACCTGCAA
GATAAACTGC AATGGGAAAA TCGCCAAAGA GAAGAGTTTA TCCTGCAGCT TATCAAAGCA
GAAACCGATG ATAGGCAGTT ACATCGCTGG GCAAAACAAC TTGATATTGA TATGAGTATG
CCAAGAGTCG CGGCTATCAT AGAGATCAGT GAGAAAAGTA CGCCAATAAA AATACCGAAA
CGGCCCTCAG ATCCCCTTGC CATTGACTTA GCGGATACCC TTCAAGTGAA TGCTTCTGAT
GATCGCAACC ACAGGGTCGG AGAAACCCTT AAGCAAGTGT TGCATTTACT GCAATACCCC
GATCGTGGCA ACTTAATAGC CATGACCTCC ATGTCGCAGC TTGTGATTTT AAAACCCGCT
TTTTTAGATG GAAAACAGTG GGATCCAGAG CTTGAGAATC AACGTATAGA TCGATTGCTC
CAGCGCTTAC CCGCGCAGAT GAACCTTAAT TTTAAAATCG CCCTAGGTCA TTTTTTCCCC
GAAAACGGCG GTATTGCACG CTCCTATCAA ACGGCATTGG AAACCTTAGC ACTGGGTAAA
CAACTCAACC CAGAAGGGAA TAAATACCTG TTCGAAGATT ATTCACTGCA AGTACTGCTT
TCAGGGCTTA AATATGACTG GCGTGGCCAA GCACTGGCAA TGCCTTATCA ACAACTTGCA
AAAGCGGATA AAAACGGTCA ATTACGTAAA ACCTTAGCCG CCTATATCAC CCACTTCGGT
GATGCCCAGC AATGTGCTAA CACCTTATTT ATTCACCGTA ATACCCTAAG GTATCGCCTC
GATAAAATTC AACAAATCAC CCAAGCCGAT ATTCAATCCT TACATGGATT GCTAAGCCTG
TATCTCGGGC AGCTTATTGA TTCTTCAAAA AACACGGGGT AA
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| Protein sequence | MYLLDSAIAK QIVSRTMKII GHNINVMNGQ GMILGSGDPK RIGSIHEGAL LAIAQNRNVE
ISQEVAASLH GVKPGINLPL HYQGQIIGVV GITGDPNELT HYGELLKMTA EMIVEQANLQ
DKLQWENRQR EEFILQLIKA ETDDRQLHRW AKQLDIDMSM PRVAAIIEIS EKSTPIKIPK
RPSDPLAIDL ADTLQVNASD DRNHRVGETL KQVLHLLQYP DRGNLIAMTS MSQLVILKPA
FLDGKQWDPE LENQRIDRLL QRLPAQMNLN FKIALGHFFP ENGGIARSYQ TALETLALGK
QLNPEGNKYL FEDYSLQVLL SGLKYDWRGQ ALAMPYQQLA KADKNGQLRK TLAAYITHFG
DAQQCANTLF IHRNTLRYRL DKIQQITQAD IQSLHGLLSL YLGQLIDSSK NTG
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