Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1452 |
Symbol | |
ID | 5079702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1651524 |
End bp | 1652402 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498581 |
Product | ABC transporter related |
Protein accession | YP_001182976 |
Protein GI | 146292552 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACTA TTTCTAATCT CACTAAAACC TATGATAACG GTGTTAAAGC ACTCGATGGG GTTGATTTAA CGATTTCCAA AGGGATGTTT GGTTTACTCG GACCCAATGG CGCTGGCAAG TCATCACTGA TGCGTACCAT TGCTGCCCTG CAAAGTGCCG ACAGCGGCAG CATTGTATTT GATGGTATTG ACGTATTAGC CGATCCTCAA GCACTACGTA AAACCTTAGG CTATTTACCG CAGGATTTTA ATGTTTATCC GCGTATTAGC GCCTATGACC TTTTAGATCA TTTAGCTATT CTTAAGGGCA TTAATCAAAG CAAACTGCGT AAAGAGGCGG TTGAAGGATT ACTGGCTCAC ACCAATCTTT ATCAGCATAA AAATAAAGCG GTTAGCGGTT TCTCTGGCGG TATGCGTCAG CGTTTTGGTA TTGCTCAGGC ATTGCTTGGT GATCCTAAAT TATTGATTGT GGATGAGCCT ACCGCGGGTC TCGATCCTGA AGAACGTAAC CGTTTCCATA ACTTGCTGGT GAGTTTAGGC GAGGAAAAAG TGGTGATCCT CTCGACTCAC ATTGTCGAAG ATGTGTCTGA ACTCTGCGCT AATATGGCGG TTTTGGCATC GGGTAAAATT CTGCTTCAAG GCAATCCACA TCAATTGGTG GGTGAATTAA CGGAAAAAAT TTGGACTAAG ACTGTAAGTC AAGCACAGGC GCAGGAGCTT GAAGCGCAAT TACCTGTGAT TTCTAAGCGT TTATTAGCGG GACGCACGGT CCTTAATGTG ATGGCTGAAA CTTGTCCTGA AGGATTTACC CCTACGACTG CTGGGCTTGA AGATCTGTAT TTTTCTACCT TACACAGCCA CCGCCGTCAG GCTGCCTAA
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Protein sequence | MLTISNLTKT YDNGVKALDG VDLTISKGMF GLLGPNGAGK SSLMRTIAAL QSADSGSIVF DGIDVLADPQ ALRKTLGYLP QDFNVYPRIS AYDLLDHLAI LKGINQSKLR KEAVEGLLAH TNLYQHKNKA VSGFSGGMRQ RFGIAQALLG DPKLLIVDEP TAGLDPEERN RFHNLLVSLG EEKVVILSTH IVEDVSELCA NMAVLASGKI LLQGNPHQLV GELTEKIWTK TVSQAQAQEL EAQLPVISKR LLAGRTVLNV MAETCPEGFT PTTAGLEDLY FSTLHSHRRQ AA
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