Gene Sputcn32_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1452 
Symbol 
ID5079702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1651524 
End bp1652402 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content45% 
IMG OID640498581 
ProductABC transporter related 
Protein accessionYP_001182976 
Protein GI146292552 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACTA TTTCTAATCT CACTAAAACC TATGATAACG GTGTTAAAGC ACTCGATGGG 
GTTGATTTAA CGATTTCCAA AGGGATGTTT GGTTTACTCG GACCCAATGG CGCTGGCAAG
TCATCACTGA TGCGTACCAT TGCTGCCCTG CAAAGTGCCG ACAGCGGCAG CATTGTATTT
GATGGTATTG ACGTATTAGC CGATCCTCAA GCACTACGTA AAACCTTAGG CTATTTACCG
CAGGATTTTA ATGTTTATCC GCGTATTAGC GCCTATGACC TTTTAGATCA TTTAGCTATT
CTTAAGGGCA TTAATCAAAG CAAACTGCGT AAAGAGGCGG TTGAAGGATT ACTGGCTCAC
ACCAATCTTT ATCAGCATAA AAATAAAGCG GTTAGCGGTT TCTCTGGCGG TATGCGTCAG
CGTTTTGGTA TTGCTCAGGC ATTGCTTGGT GATCCTAAAT TATTGATTGT GGATGAGCCT
ACCGCGGGTC TCGATCCTGA AGAACGTAAC CGTTTCCATA ACTTGCTGGT GAGTTTAGGC
GAGGAAAAAG TGGTGATCCT CTCGACTCAC ATTGTCGAAG ATGTGTCTGA ACTCTGCGCT
AATATGGCGG TTTTGGCATC GGGTAAAATT CTGCTTCAAG GCAATCCACA TCAATTGGTG
GGTGAATTAA CGGAAAAAAT TTGGACTAAG ACTGTAAGTC AAGCACAGGC GCAGGAGCTT
GAAGCGCAAT TACCTGTGAT TTCTAAGCGT TTATTAGCGG GACGCACGGT CCTTAATGTG
ATGGCTGAAA CTTGTCCTGA AGGATTTACC CCTACGACTG CTGGGCTTGA AGATCTGTAT
TTTTCTACCT TACACAGCCA CCGCCGTCAG GCTGCCTAA
 
Protein sequence
MLTISNLTKT YDNGVKALDG VDLTISKGMF GLLGPNGAGK SSLMRTIAAL QSADSGSIVF 
DGIDVLADPQ ALRKTLGYLP QDFNVYPRIS AYDLLDHLAI LKGINQSKLR KEAVEGLLAH
TNLYQHKNKA VSGFSGGMRQ RFGIAQALLG DPKLLIVDEP TAGLDPEERN RFHNLLVSLG
EEKVVILSTH IVEDVSELCA NMAVLASGKI LLQGNPHQLV GELTEKIWTK TVSQAQAQEL
EAQLPVISKR LLAGRTVLNV MAETCPEGFT PTTAGLEDLY FSTLHSHRRQ AA