| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1420 |
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| Symbol | |
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| ID | 5079670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1614612 |
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| End bp | 1615610 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640498549 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001182944 |
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| Protein GI | 146292520 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCA ATCTTAGCTT TATTATGCGT GTGGGCATGA GTTGTGCACT TTTGCTTTTG
GTGGCTTGTA CTGAAGAATC ACCAAGGGTG CTGGGCACTG TTGAACGGGA CAGGCTAACG
CTCACCGCTC CCGTCGGGGA ACTGATTACT CAAATAAATG TGGTTGAAGG TCAAAGGGTT
AAAGCGGGTG AAGTGTTAAT TCAGCTCGAT GCAACCTCAG CTAATGCGCG CCTAGCCCTG
CGCCAAGCTG AGCTTGATCA GGCAAAAGCT AAGCTTTCCG AGGCTGTCAC TGGTGCGCGT
TTAGAGGATA TTGATAGGGC TAAAGCCGTA CTCGATGGCG CGAATGCCAC TGTGAAAGAG
GCTCAGCGAG CCTTTGAGCG AACAAATCGT TTATTTGCCA CAAAAGTGCT TAGCCAAGCG
GATTTAGATA CGGCCCGAGC GGCGCGGGAT ACCAGTTTAG CGAAACAGGC TGAGGCGCAG
CAGAGTCTAC GTTTGTTAGA AAATGGCACT CGTAGTGAGC AACTCGCGCA GGCCAAAGCA
GCAGTTGCTG CGGCCAGTGC CAGTGTCGCA GTTGAGCAAA AAGCTTTAGC AGACTTGAGC
TTAGTGGCGG CGCGTGATGC CGTTGTCGAT ACGTTGCCTT GGCGCGAGGG CGATCGTATC
GCCGCAGGCA CTCAGTTGAT TGGTTTACTG GCGAGCGATA ATCCCTATGT GCGGGTATAT
TTACCTGCGA CTTGGTTAGA CAGAGTGAAG GTGGGCGATA GCGTGAATAT CCTGGTGGAC
GGTCGTGAGG CACCGATTGC GGGTACAGTG CGCAATATTC GCAGTCAACC CGCTTACACG
CCGTTTTATG CGCTCAATGA ACGCGATCGT GCACGGCTGA TGTATCTAAC GGATATCACA
ATTTCCAGCG CGGGTCAGGA TCTACCTACA GGCATGGCAT TAGAAGTTGA ACTCGATGTG
TTGCAACTCG ATGTGCTGCA AAGAGTGCAG CAGCCATGA
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| Protein sequence | MSANLSFIMR VGMSCALLLL VACTEESPRV LGTVERDRLT LTAPVGELIT QINVVEGQRV
KAGEVLIQLD ATSANARLAL RQAELDQAKA KLSEAVTGAR LEDIDRAKAV LDGANATVKE
AQRAFERTNR LFATKVLSQA DLDTARAARD TSLAKQAEAQ QSLRLLENGT RSEQLAQAKA
AVAAASASVA VEQKALADLS LVAARDAVVD TLPWREGDRI AAGTQLIGLL ASDNPYVRVY
LPATWLDRVK VGDSVNILVD GREAPIAGTV RNIRSQPAYT PFYALNERDR ARLMYLTDIT
ISSAGQDLPT GMALEVELDV LQLDVLQRVQ QP
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