| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1342 |
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| Symbol | |
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| ID | 5080969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1520045 |
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| End bp | 1521526 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498474 |
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| Product | PTS system, glucose-like IIB subunint |
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| Protein accession | YP_001182869 |
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| Protein GI | 146292445 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGAA CGCTGGAATC AAGTCGTCAA ATCCGAGCTC GTCGCTTAGG TCGGTTTGTC
ACACAGCAGT GGTTTAAATT TGCTCAGCGC TTAAGTCAGG CGCTGCTCAT TCCTATTGCT
ATTTTACCTG CTGCAGGGAT CATGCTCGGC TTAACGGCCA CCCCGATTGC TTTTGTCCCC
GAAGAGTTAA CCATTTTGAT GTTGGCAGTG GGTAAATTGA TTTTTGCTAT TATGCCGATG
TTGTTTGCCG TGGCCGTTGC CATTGGGTTT TGTCGTGATC AAGGTATTGC CGCATTCACG
GCGGTATTTG GTTATGGCGT GATGACGGCA ACATTAGCAG CGTTGGCGGA TCTTTACCAT
TTACCGACTC AAGCGCTGCT GGGAATGGAA ACCTTAGATA CTGGGATTGC AGGTGGCATG
TTGCTCGGCG GCATAACCTG CTTAACGGTG CGAGTGAGCC AATATATTCG ATTACCTGCT
ATTTTCTCCT TCTTTGAAGG ACGACGCAGT GCATCTTTAC TCATTATTCC ATTAGCAATG
TGTTTAGGTT ACGTGCTTGC CCACATCTGG CCGTCATTAT CATTATTGAT TGAGCACGTA
TCCGATTGGG CTGTTTATCA AAAGCCTGCC ATGGCTTTCG GTGTCTATGG TACGTTTGAG
CGTTTGCTTA TTCCCCTTGG GTTGCATCAT ATTTGGAATG CGCCGTTTTA CTTAGAAGTG
GGGCAATTTC AGACTCAAGG TACAGACGTT ATTCGTGGAG AGGTCGCACG TTATTTAGCA
GGCGATCCTC AAGCTGGCAA TCTTGCTGGT GGGTATTTGA TTAAAATGTG GGGACTACCT
GCGGCGGCAC TTGCTATGTG GCGTTGTGCC GATAGATCTG AGCGCAATCG TGTGGCGGGT
ATTATGCTTT CAGCGGCGGC GGCTTGCTGG CTGACAGGTG TGACTGAACC TATCGAATTT
GCATTTCTGT TTGTGGCGCC GATCCTCTTT ATTATTCATG CTCTGTTATC TGGTTTTGCA
TATTTTATCT GCATAGTGCT TGATATTCAC CATAGCATTG TCTTTTCCCA TGGCTTGGTA
GACTTTATGC TTTTATTCCC TCTTTCACGT AATACTAGTT GGTTTATTTT TCTTGGACCT
TTAACCGCAA TAGTATATTA CCTATTGTTT AGATTGAGCA TTATAGCTTT CAACCTGAAA
ACGCCCGGTC GATTAGAACC TGAGGATGGG CATAGGAGTA AGGAAAGTTT AAGGGCGATT
ATTGCCGCAT TGGGGGGGCG TGAAAATATT GTTGAACTTA ATGCTTGTCT AACAAGGCTG
CGCTTAAGTG TTAATCGGCC TGAGCTAGTG AATAAAGTGC GTTTGAGTCA GTTAGGGGCC
AAGGGCGTTA TTGTGATGGG AAAAGGGGTG CAAGTCGTTT ATGGCACTAA AGCTGAAACT
CTGCGTAAAG TATTGCAACG CTATATCGAT ACCCGTCGGT AA
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| Protein sequence | MAGTLESSRQ IRARRLGRFV TQQWFKFAQR LSQALLIPIA ILPAAGIMLG LTATPIAFVP
EELTILMLAV GKLIFAIMPM LFAVAVAIGF CRDQGIAAFT AVFGYGVMTA TLAALADLYH
LPTQALLGME TLDTGIAGGM LLGGITCLTV RVSQYIRLPA IFSFFEGRRS ASLLIIPLAM
CLGYVLAHIW PSLSLLIEHV SDWAVYQKPA MAFGVYGTFE RLLIPLGLHH IWNAPFYLEV
GQFQTQGTDV IRGEVARYLA GDPQAGNLAG GYLIKMWGLP AAALAMWRCA DRSERNRVAG
IMLSAAAACW LTGVTEPIEF AFLFVAPILF IIHALLSGFA YFICIVLDIH HSIVFSHGLV
DFMLLFPLSR NTSWFIFLGP LTAIVYYLLF RLSIIAFNLK TPGRLEPEDG HRSKESLRAI
IAALGGRENI VELNACLTRL RLSVNRPELV NKVRLSQLGA KGVIVMGKGV QVVYGTKAET
LRKVLQRYID TRR
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