| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1319 |
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| Symbol | |
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| ID | 5080946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1486605 |
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| End bp | 1487978 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498451 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001182846 |
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| Protein GI | 146292422 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAC CAACACTTTT TTATCACCTA CAGGATTTAG GTGCCGAGCA AGCACTTGTG
CAACTTGAGG GTGCCTTACA TTTTAATAAA CTGCGTAGTA TTGATGACTT ACCTTGGCTT
GCCCAGCTTG AAGCCAATCA TGTTGATGTT GCAGTTATTG AGTTTCCTTG TCTTAGTCAC
GAGGACTATC TTGATTTAAT GAAAAATGCA GCTATGTCGG GGATTGAGTT TATTTTTCTC
TCTAATGGTC AGCCCAATCC CAACCTAGAT AAGCTTATGG CGCAATATGC AGGTTATCAT
CTTCGCAAGC CATATGATAT GTCACTGATA AGTAGTATTT TAATTGATTT TGCCCAGCAT
TTAGTCGCTA GTTCACCCAG CCGTTCAAGC CCCTTTTTAA GCGAGTTAGA CCAATACGGT
TTACTTGTCG GTTCGTCGGC GCCTATGCAT AAGTTGTATC GCACCATTCG TCGTGTATCA
GTCACCGACA GTAATGTATT AATTATTGGC GAGAGTGGTG TAGGTAAAGA GTTAGTCGCT
AATACTATCC ACTTAGCAAG CCCGAGAGTG AATGAGCCTT TTATTGCGAT TAACTGCGGC
GCTCTCAGTC CCGAATTGGT TGATAGTGAG TTATTTGGAC ATGTTAAAGG GGCGTTTACT
GGTGCAAATC GGGATCATAA AGGGGTTTTT GAACAGGCGG AAGGTGGAAC GTTATTTCTC
GATGAAATAA CGGAAATGCC TATAGAGCAT CAAGTAAAGT TACTTAGAGT GCTAGAAAAT
AATGAGTATC GCCCAGTGGG GGGAGACAAA GTACTCCACT CAGATGTACG CATTGTGGCG
GCAACGAATC GTGATCCTCT TGCGGCAATA GAGGCTGGGC TATTTCGAGA GGATTTATAT
TTTCGCTTGG CTCAATTCCC GATTAGAGTT CCACCATTAA GGGTTCGTGG TGAAGATATT
ATCGGATTAG CGCAGCATTT TCTGGCTTAT CGTAATGTGG CTGAAAAGCA GTGCAAAGTT
TTCTCAGAGG AAAGTCTGCG GATGATTGCT GCAAATCGTT GGACAGGCAA TGTACGCGAG
TTAAAACATG CCGTTGAGCG GGCTTATATT CTGGCGGATC AAGAGATTTT GCCGAGTCAT
TTGCAGCTAG AACAGGAAAT CGATAACGCC AAAATTGCTG AGGAAGAAGT GATTATTCCC
CAAGGGATGC GTTTAGATGA TTTGGAGAAA ATTGCCATTT ATCAAGCACT AGAGTCCAGT
AATGGCAATA AAACCGATAC TGCTGAACAA TTAGGGATTA GCGTTAAAAC CCTCTATAAC
AAGCTCAGTA AGTATGAACA GCAAGTCGAG GCAGGTGAGC CTACTGCAAA ATAA
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| Protein sequence | MARPTLFYHL QDLGAEQALV QLEGALHFNK LRSIDDLPWL AQLEANHVDV AVIEFPCLSH
EDYLDLMKNA AMSGIEFIFL SNGQPNPNLD KLMAQYAGYH LRKPYDMSLI SSILIDFAQH
LVASSPSRSS PFLSELDQYG LLVGSSAPMH KLYRTIRRVS VTDSNVLIIG ESGVGKELVA
NTIHLASPRV NEPFIAINCG ALSPELVDSE LFGHVKGAFT GANRDHKGVF EQAEGGTLFL
DEITEMPIEH QVKLLRVLEN NEYRPVGGDK VLHSDVRIVA ATNRDPLAAI EAGLFREDLY
FRLAQFPIRV PPLRVRGEDI IGLAQHFLAY RNVAEKQCKV FSEESLRMIA ANRWTGNVRE
LKHAVERAYI LADQEILPSH LQLEQEIDNA KIAEEEVIIP QGMRLDDLEK IAIYQALESS
NGNKTDTAEQ LGISVKTLYN KLSKYEQQVE AGEPTAK
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