| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1297 |
|---|
| Symbol | |
|---|
| ID | 5081024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1461791 |
|---|
| End bp | 1463089 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640498429 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001182824 |
|---|
| Protein GI | 146292400 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000005048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAACT CTTATTCAGG GTACCGGTTG TTTACACGCT TGGCAGTGTA TTTACTGCTT
TGTTTGCTAA TTGGTTTATT GGTAGGGAAG CCCCTCTGGA TACTCGTTGT TGGTCTGCTC
GGTTTACTGT GTTGGCATTA CCAGCAATTG ACTCGTCTCA ACTTTTGGCT GTGGCGAGAC
AAAAAACTCA CTCCACCTCA AGGGAGCGGT AGTTGGGAGG GCGTGTTTAA TGGTATTTAT
CGCCTACAGG GAAAAAACCG CCGTAGAGTG GGGCAACTTG CTGCGCTTTT AGCACGATTC
CGTCAAGGAG CTGAAGCATT ACCCGATGCT GCTGTGGTGC TTGATTCTGA GCATAATATT
TTATGGTGTA ATAAGTTAGC GCAACTGATT CTCGGTTTTG TGTGGCCGCA GGATAATGGT
CAACGAATCG ATAATTTAAT CCGCCATCCT GATTTTTCCG CTTATATCAA AAGTGCACAA
TATAAAGAAC CGCTGGAGTT ACCTTCGCCT GTATCGGATA AGCGTTTACT TGAAATCCGT
ATCATGGCTT ATGGTGACAG ACAATTGTTA TTAATTGCGC GGGATATTAC TCGTATACGT
CAGCTAGAGG GAATGCGTAA AGAGTTTGTC GCTAATGTGT CACACGAACT TAAAACGCCG
CTCACTGTGT TACAGGGCTA CCTCGAAATG ATGCAAAGTA TGGCAGAGCC TGATTCGATG
AATGTCAAGC CGCTGGCATT AATGCAGCAG CAGACTCAAC GCATGCAATC CATGGTCGAA
CAGCTATTAG TGCTCTCGCG AATTGAAGAT GCGGCAGATA TAAATTTAGA GAACACCGTT
AATATGTCGC AATTAATGGA AGTCCTTAAA GAAGAAGCGA AAGCAGTTGC TCAAGATAGG
TATGAGTTGA GTTTTTACTG TGAATCAGGA CTCGATTCAC ACGGTAATGA GTTACAACTT
AGAAGTGCTT GTTCTAATTT AATTTCTAAT GCTATTCGCT ACACAGAGCC TGGCGGCAAA
ATTACCGTAC AGTGGCGAAG TGTGGCTACG GGCGGGCTTT TTAGTGTGAC AGATACGGGG
GAAGGTATTG CACCACAACA CATTGCTCGT TTAACGGAGC GTTTTTACCG TGTCGATAGT
GCTCGTTCTC GCCAAACCGG CGGCAGTGGC TTAGGGCTGG CGATTGTTAA ACACGCACTT
AATCACCACC ATAGTGAGTT AACGATTACA AGTGAAGTGG GAAAAGGGAG TACTTTTAGC
TTTGTGATCC CGCTGCATTT AATCAAACGC AAGAAATAG
|
|---|
| Protein sequence | MFNSYSGYRL FTRLAVYLLL CLLIGLLVGK PLWILVVGLL GLLCWHYQQL TRLNFWLWRD
KKLTPPQGSG SWEGVFNGIY RLQGKNRRRV GQLAALLARF RQGAEALPDA AVVLDSEHNI
LWCNKLAQLI LGFVWPQDNG QRIDNLIRHP DFSAYIKSAQ YKEPLELPSP VSDKRLLEIR
IMAYGDRQLL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQSMAEPDSM
NVKPLALMQQ QTQRMQSMVE QLLVLSRIED AADINLENTV NMSQLMEVLK EEAKAVAQDR
YELSFYCESG LDSHGNELQL RSACSNLISN AIRYTEPGGK ITVQWRSVAT GGLFSVTDTG
EGIAPQHIAR LTERFYRVDS ARSRQTGGSG LGLAIVKHAL NHHHSELTIT SEVGKGSTFS
FVIPLHLIKR KK
|
|---|
| |