Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1285 |
Symbol | |
ID | 5081012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1444638 |
End bp | 1445723 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498417 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_001182812 |
Protein GI | 146292388 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000107001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACC TATTTTTATT TTGCCGCGCA GGTTTTGAAA AAGAATGCGC TGCAGAAATC CAACAGCGAG CCGGTGAGCT CAATGTGGGT GGCTTTGTTA AAGCCAACAA TAACGACGCT TATGTTGTAT ACCAATGTTT TGAAGAAGAC GCTGCCGATA CATTAGTCAA ACAATTACCT TTAGATTCGC TCATTTTCGC CCGCCAGATG TTTGCTGCTA GCGACTTGTT AGTCGACTTG CCTGAAAGTG ACAGAATAAG CCCAATCGTT GCGGCGCTCA GTGACGTCAG CAAAGCGGGT GAAGTGCGGG TTGAAACACC TGATACGAAC GAAGCGAAAG AGCTATCGGC TTTTTGCCGT AAGTTCACCG TGCCGTTACG CCAGCATTTG AAAAAATCAG GTAGTTTGCT TGCGCAGGAA AATCCCAAAC GTCCGATTAT CCACGTGTGT TTTATTGGAC CCGGCCGTGC CTATGTGGGT TATTCCTATA GCAATAACAG TTCGCCACAT TTTATGGGCA TTCCACGTCT TAAAATGGCG GCGGATGCAC CGAGTCGTTC TAGTTTGAAA CTCGACGAAG CCTTTGGGCA GTTTGTGCCT AAAGAAGAGC AGGAAGAACG TATTCGCAGT GGCATGAATG CAGTGGATTT GGGCGCTTGC CCAGGGGGAT GGACTTACCA ATTGGTTCGC CGTGGTATGT TTGTGTCAGC GGTTGATAAT GGTCCCATGG ATGAAAAACT GATGGAAACG GGCCAAGTGA AACATTACCG TGAAGACGGT TTCCGTTTCG AACCGCAGCG CAAAAATATC TATTGGTTAG TGTGTGATAT GGTTGAGAAA CCTGCGCGCG TTGCTGAACT GATTGAAGCT TGGGCGATTA ACGGTTGGTT TAAGGAAGCG ATTTTTAACC TTAAATTACC GATGAAGAGC CGCTATAAAG AAGTGACAGC CATTCTTGAG ACCATGCAGA CGATTCTTAA AGAGAATGGT GTGACTGATT TTAAAGTGCA GTGTAAGCAT CTTTATCACG ACCGTGATGA AGTGACAGTG CATTTATGGC TACGTCCTAA TACCGCGTGG AATTAA
|
Protein sequence | MKNLFLFCRA GFEKECAAEI QQRAGELNVG GFVKANNNDA YVVYQCFEED AADTLVKQLP LDSLIFARQM FAASDLLVDL PESDRISPIV AALSDVSKAG EVRVETPDTN EAKELSAFCR KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYVG YSYSNNSSPH FMGIPRLKMA ADAPSRSSLK LDEAFGQFVP KEEQEERIRS GMNAVDLGAC PGGWTYQLVR RGMFVSAVDN GPMDEKLMET GQVKHYREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA IFNLKLPMKS RYKEVTAILE TMQTILKENG VTDFKVQCKH LYHDRDEVTV HLWLRPNTAW N
|
| |