Gene Sputcn32_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1284 
Symbol 
ID5081011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1444068 
End bp1444460 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID640498416 
Producthypothetical protein 
Protein accessionYP_001182811 
Protein GI146292387 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00814173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG GTTTATTGTT ACTCGCCGCC GTAAGCGGAT TCTTAGCCGT CGCCTTAGGG 
GCTTTTGGTG CCCATGGTTT AAAAGCGGTC GCGCCACCAA ACTTAATCGA AGTCTTTAAC
TTAGGTGTGC AATATCATTT CTACCATACC TTTGCCCTCA TCATGGTTGC CTTCTCGGGC
CAATGGTTAA CCTCGCGTTT ACTGGACTGG TCGGCATATC TCTTTGTCGC AGGCATAGTA
CTATTTTCGG GTTCACTATA TGGACTGGCC TTGTTTGGGA CTAAGTGGTT AGGTCCTATT
ACGCCTATGG GTGGTGGTTG TTTTTTACTC GGTTGGTTAT TATTTGCCGC CGCGGTATGG
CGTCACAAAG TTATCGACGG TCACGAGTCT TAA
 
Protein sequence
MRKGLLLLAA VSGFLAVALG AFGAHGLKAV APPNLIEVFN LGVQYHFYHT FALIMVAFSG 
QWLTSRLLDW SAYLFVAGIV LFSGSLYGLA LFGTKWLGPI TPMGGGCFLL GWLLFAAAVW
RHKVIDGHES