| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1276 |
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| Symbol | |
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| ID | 5081003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1437170 |
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| End bp | 1438051 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498408 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001182803 |
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| Protein GI | 146292379 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0835849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGCCA GTACAATTCA AGAGTATCAA CTGCGAGTTG ATACCCAATT AAAACAGCGT
TTTAGTACGC TTGAAGATAC CGCCCCCCAA TTGAAAGCGG CAATGCAATA TGGTGCCTTG
CTGGGAGGTA AACGCATTCG TCCCTTCCTT GTTTACAGTG TGGGGCAAAT GTTCGGGGTT
ACTTTAGAAA AATTAGATGC CTGTGCTGCT GCTATTGAGT GCATTCATGC CTATTCTTTA
ATCCATGATG ATTTACCGGC AATGGACGAT GATGCGCTGC GCCGTGGTCA GCCTACCGTT
CATATCGCTT TTGATGAAGC GACGGCGATT CTTGCTGGAG ATGCGCTGCA AACCTTAGCC
TTTGAGATTG TGACCGAAGC TGTTTCAGGA ATAAGCAGCG AGCAGCATAT TGCTATGGTT
AGGGCCCTAG CAAAAGCATC AGGTTACCGT GGTATGTGTG GCGGTCAAGC AATCGATTTA
GCCTCAACCG ATAAACAAAT TGATCTTAAG GCATTAACTC AGCTACATAA TATGAAAACG
GGCGCACTTA TCAGTTGCGC CGTTGAGTTA GCCTTGATCG CCGCAAATGC GCCTAAAGAT
CAATATCAAA CCATGATGAC ATTTGCCCAT GCGGTAGGAC TTGCCTTCCA AGTGCAAGAC
GATATTCTGG ATATCATTGC GACTACAGAA GAATTGGGCA AACCACAAGG TTCGGACACA
GAATCAAATA AGAGCACTTT TCCACAACTG CTTGGACTAC AGGGAGCGAA AGACACAGCA
GCACAACTGA TCCAAGAGGC ACTATCAGCG CTGGCTAAAT TGCCATACAA TAGCCAGTTA
ATTGCAGACT TCGCCCGCTA TATCATTGAG CGAAGAATAT AA
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| Protein sequence | MLASTIQEYQ LRVDTQLKQR FSTLEDTAPQ LKAAMQYGAL LGGKRIRPFL VYSVGQMFGV
TLEKLDACAA AIECIHAYSL IHDDLPAMDD DALRRGQPTV HIAFDEATAI LAGDALQTLA
FEIVTEAVSG ISSEQHIAMV RALAKASGYR GMCGGQAIDL ASTDKQIDLK ALTQLHNMKT
GALISCAVEL ALIAANAPKD QYQTMMTFAH AVGLAFQVQD DILDIIATTE ELGKPQGSDT
ESNKSTFPQL LGLQGAKDTA AQLIQEALSA LAKLPYNSQL IADFARYIIE RRI
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