Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1254 |
Symbol | |
ID | 5080981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1408419 |
End bp | 1409864 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498386 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001182781 |
Protein GI | 146292357 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG AAACACTCGG TCTATCTTCT CCTATTTTGA ATGCGATAAC TGAGTGTGGC TATCAGCAAC TCACTCAAGT ACAAGAGAAA GTGATCCCAC TAGCCTTTGA AGGCAAAGAT ATTATGGCCT GCGCCCAAAC GGGTACGGGG AAGACGGCAG CCTTTGCTCT GCCCGTACTT GAAAAGTTGG CGGCTGAGAT TTTAGTTAAT GATGACAACG ACAAACCGAT TTTACGCGCC TTGGTGATGA CCCCCACCCG CGAACTGGCT ATTCAAGTTT GTGACAATAT CCAGAAATAC AGCCAATTCC TGCCACTGAA AACAATCGCA GTTTACGGCG GCGCCAATAT GAATCCCCAG CGTAAAGGGG TGGAGCAGGG CGTTGATATC CTCGTGGCGA CACCGGGTCG ACTCTTCGAC ATTATCGGCC AATTCCAGTT AGATTTGTCG AGTGTGACAA CCTTAGTGAT CGATGAAGCC GATCGCATGT TAGATATGGG ATTTGTACGC GATATTGAAA AAGTGAAACG CTTAATCGCG CCCGTGCACC AAACCATGCT GTTCTCGGCC ACATACAGTG ATGCAGTCAA ACAGCTTGCA CAAAAGATGC TAAATGAGCC TCAGTGGGTG AATGTTGCCG ACACGACGAC CGCATCTACC GTTGTTCAAG AAGTGTATCG GGTTGATAAG CGCCGTAAAG CCGAGTTGTT GTCAGAACTC GTTGGCCGTA ACAATTGGCG CCAAGTCCTC GTGTTTGCAA GCACTAAGGA AAGCGCCGAG CATTTATTAC AAGAATTAAA GCTTGATGGC ATAGCCGCTG GTGTATTCCA CGGTGATAAA ACCCAAGGCG CCCGTAATAG GGTATTGGAA GACTTTAAGC TAGGTAAGTT GCGTGTATTG GTTGCGACCG ATGTTGCCGC CCGCGGCTTA GATATTCAAG CACTACCTTT GGTTATCAAC TTAGAGTTGC CATTTTTTGC CGAAGATTAT ATCCACCGCA TTGGCCGAAC AGGGCGTGCG GGATTAGCGG GGCGTGCGAT TTCGTTTGTT TCGCCCTCTG ATGATGAGAT GCTGGCTGAA ATTGAAGCTT TAATTGAGCA GAAACTGCCA GTGTCAGTGC AGTCCGGTTA TGAGGAAGGT ACACCGCTGC CCGCTCGTTA TCGTGATATT CCCGCATCGC CGACCAAACC CGCTAAATGG AGTTATAAAG CGCCAAAGGA TCGTGCTATC GGTAAATCCA GCGAAAGCCA AGCTCGTTCT CGTCAGAACA TCGGACGCGA TGCGATGCGA GAAAGCCCGA CTCGTGAGGG AAAGTATGCG AAAGATAAGG CGCATGGTGC AGAAGGAAAA GGATCTGCGG GCAAACCTTT TAATACGACT AAACCAAAAC CACACTCAGG GAGTCGTTCT GGGTTTGGCG TATCTCGCGA TAAGAAAAAC GGCTAG
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Protein sequence | MKFETLGLSS PILNAITECG YQQLTQVQEK VIPLAFEGKD IMACAQTGTG KTAAFALPVL EKLAAEILVN DDNDKPILRA LVMTPTRELA IQVCDNIQKY SQFLPLKTIA VYGGANMNPQ RKGVEQGVDI LVATPGRLFD IIGQFQLDLS SVTTLVIDEA DRMLDMGFVR DIEKVKRLIA PVHQTMLFSA TYSDAVKQLA QKMLNEPQWV NVADTTTAST VVQEVYRVDK RRKAELLSEL VGRNNWRQVL VFASTKESAE HLLQELKLDG IAAGVFHGDK TQGARNRVLE DFKLGKLRVL VATDVAARGL DIQALPLVIN LELPFFAEDY IHRIGRTGRA GLAGRAISFV SPSDDEMLAE IEALIEQKLP VSVQSGYEEG TPLPARYRDI PASPTKPAKW SYKAPKDRAI GKSSESQARS RQNIGRDAMR ESPTREGKYA KDKAHGAEGK GSAGKPFNTT KPKPHSGSRS GFGVSRDKKN G
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