| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1251 |
|---|
| Symbol | glgC |
|---|
| ID | 5081563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1402193 |
|---|
| End bp | 1403455 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640498383 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_001182778 |
|---|
| Protein GI | 146292354 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATG TACGTTATAT CAGTAATTTA ACTCGTGAAA CCTATGCATT GATTCTGGCT
GGCGGGCGGG GCTCGCGTTT GCATGAATTG ACCGATTGGC GCGCTAAGCC CGCGCTCTAT
TTTGGTGGTA AGTTTCGCAT TATTGATTTT CCCCTATCAA ATTGCATCAA TTCGGGGGTT
CGCCGTGTGG GGGTCGTTAC CCAATATAAG TCCCATTCCT TAATCCGCCA TGTGATGCGT
GGCTGGGGCC ATTTTAAGAA AGAGCTCGGG GAATCGGTGG AGATTTTACC CGCATCACAA
CGTTTTTCTG AAAACTGGTA TCAAGGCACT GCGGACGCTG TCTTTCAAAA TATCGATATT
ATCCGCCATG AGTTGCCTAA ATATGTAATG GTACTGTCCG GTGATCATGT TTATCGCATG
GATTACGCAG GGATTTTAGC CGCCCATGCT GAATCTGGTG CGGATATGAC GGTCTCTTGC
CTTGAAGTGC CCATCGCCGA AGCTGCAGGC GCCTTTGGGG TGATAGAGGT CGATGACAAT
ATGCGGATAT TAGGTTTTGA AGAAAAACCG CAGCGGCCTA AACCATCCCC CGATAACCCA
GAAATGTGTT TAGCATCCAT GGGCAACTAT GTATTTAACA CAGAGTTTTT ATTTGAGCAG
CTCAAAAAAG ACTCTCAAAA CGCAACCTCT GACCGTGACT TTGGCAAAGA TATTATTCCT
TCGATCATCG AAAAACATAA TGTGTTCGCT TATCCCTTTA AGAGTCCATT CCCGAATGAA
CAGGCCTATT GGCGGGATGT GGGAACATTA GACTCGTTTT GGCAAGCCAA TATGGAATTA
CTATCGCCTA CGCCAGCCTT GAATTTATAT GATGCTAAGT GGCCCATTTG GACATTTCAA
GAGCAATTGC CCCCAGCCAA ATTTGTTTTT GATGACGATG ATAGGCGTGG CATGGCGCTA
GACTCTATTG TTTCTAGCGG CTGTATTATT TCAGGGGCAA CAGTGCGTAG GAGCGTACTT
TTTAATGAAG TGCGCGTCTG TTCTTATTCC GTAGTGGAAG ATTCGGTCGT ATTGCCCGAT
GTGGTTGTGC TGCGCCATTG TAAGATCAAA AACGCCATCA TTGACCGAGG TTGTATTATC
CCCGAGGGAA CGGTAATAGG TTACAACCAT GACCACGATA GAGCGAAGGG ATTTAGGGTC
TCGGAAAAAG GCGTCACTTT AGTGACCCGC GATATGTTGG GGTTACCAGT GGGTTATGAG
TAG
|
|---|
| Protein sequence | MSNVRYISNL TRETYALILA GGRGSRLHEL TDWRAKPALY FGGKFRIIDF PLSNCINSGV
RRVGVVTQYK SHSLIRHVMR GWGHFKKELG ESVEILPASQ RFSENWYQGT ADAVFQNIDI
IRHELPKYVM VLSGDHVYRM DYAGILAAHA ESGADMTVSC LEVPIAEAAG AFGVIEVDDN
MRILGFEEKP QRPKPSPDNP EMCLASMGNY VFNTEFLFEQ LKKDSQNATS DRDFGKDIIP
SIIEKHNVFA YPFKSPFPNE QAYWRDVGTL DSFWQANMEL LSPTPALNLY DAKWPIWTFQ
EQLPPAKFVF DDDDRRGMAL DSIVSSGCII SGATVRRSVL FNEVRVCSYS VVEDSVVLPD
VVVLRHCKIK NAIIDRGCII PEGTVIGYNH DHDRAKGFRV SEKGVTLVTR DMLGLPVGYE
|
|---|
| |