Gene Sputcn32_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1223 
Symbol 
ID5081534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1365382 
End bp1366392 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content50% 
IMG OID640498354 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_001182750 
Protein GI146292326 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCA AAATCGGGAT AAATGGCTTT GGCCGTATGG GACGTTTAGC ATTGCGCGCT 
GCTTGGGGCT GGGAAGCGGT TGAGTTTGTG CAGATTAATG ATCCCGCAGG GGATGCGGCG 
ACCTTAGCCC ATTTGCTGAC ATTCGATTCT GTGCATGGTC GCTGGCAGTA CGAAGCCAAT 
GCCGAGGGCG ATGACATTAT TATCGATGGC AAGCGTATTC ACTGTACTCG GAATAAAACC 
ATTGGGGAAA CCAATTGGTC TGGCTGTGAT GTGGTGATTG AAGCCTCGGG TAAGATGAAA 
ACCAAAGCAG TACTACAAGC CTATTTAGAT CAAGGTGTTA AACGCGTTGT GGTTACTGCG 
CCCGTTAAAG AAGAGGGCGT GTTAAATGTT GTCATGGGAG TGAATCATCA ACTCTATGAC 
AAAGCCATTC ACCCGATTGT AACCGCGGCC TCCTGTACCA CTAACTGTTT GGCGCCAATC 
GTTAAAGTGA TCCACGAAAA CCTCGGCATA GTACATGGTT CCATGACGAC TATTCACGAT 
ATTACCAACA CTCAAACTAT TTTAGATGCA CCGCATAAAG ATCTTCGTCG TGCGCGGGCC 
TGTGGTTTAA GCCTAATCCC TACGACAACA GGCTCGGCGA CAGCCATTAC CCATATTTTC 
CCTGAACTCA AAGGTAAGCT CAACGGCCAT GCCGTGCGGG TGCCATTAGC GAACGCCTCA 
TTAACCGATT GCGTGTTCGA GGTGAGTCGC CCAACAACGG AGGCTGAGGT CAATCGCCTG 
TTAAAAGAAG CCGCGGACGG GCCGCTAAAA GGCATTTTAG GTTATGAGGA ACGCCCATTA 
GTCTCGGTCG ATTATAAAAC CGATCCGCGT TCGAGCATTA TCGATGCGCT ATCGACCATG 
ATTATCAATG GCACTCAGGT CAAACTCTAC GCTTGGTATG ATAACGAGTG GGGTTATGCC 
AATCGCACCG TCGAACTGGC CCGCATGGTC GGTCTGATGG ATAAGGCATA G
 
Protein sequence
MTIKIGINGF GRMGRLALRA AWGWEAVEFV QINDPAGDAA TLAHLLTFDS VHGRWQYEAN 
AEGDDIIIDG KRIHCTRNKT IGETNWSGCD VVIEASGKMK TKAVLQAYLD QGVKRVVVTA 
PVKEEGVLNV VMGVNHQLYD KAIHPIVTAA SCTTNCLAPI VKVIHENLGI VHGSMTTIHD 
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS 
LTDCVFEVSR PTTEAEVNRL LKEAADGPLK GILGYEERPL VSVDYKTDPR SSIIDALSTM 
IINGTQVKLY AWYDNEWGYA NRTVELARMV GLMDKA