| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1116 |
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| Symbol | |
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| ID | 5081626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1254412 |
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| End bp | 1256091 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498247 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001182643 |
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| Protein GI | 146292219 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGG CCTTTTATGG ACTCAGCGAT AACCCTTTTT CAATTGCACC CAATCCCCAT
TATTTATTTT TGAGTGATAG GCACCGAGAA GCCCTAGCAC ATCTTACCTA CGGTTTGGGT
GAAACCGGTG GTTTTGTGCT GTTAACAGGT GAGGTAGGAA CAGGGAAAAC AACGGTATCC
CGTTGTTTAC TCGGGCAGTT ACCCGATAAC ACCGACACAG CATTTATCCT GAATCCCTCA
CTGACTGAAT TGGAGTTACT CGCCACTCTT TGCGATGAGT TGAAGATCCG TTATGGAGAA
AATCCAACAC TTAAGCAGTT GACCGATCAT TTAAGCCATT TTTTACTCGC GAACCATGAG
AAAGGTCGTA ACACGGTACT CATTATTGAT GAGGCTCAGC ACCTACGACC TGAAGTGTTA
GAACAATTAC GGTTGCTCAC AAATCTGGAG ACAGATACCA AAAAATTATT GCAGGTGATT
TTGATTGGTC AACCTGAGCT GCAATTGTTA CTAAAACGTC AAGAATTACG ACAGCTGGCA
CAGCGAATTA CTGCTCGTTA TCATTTATTA CCGCTAAATG AAGATGAAAT TGCACTTTAT
GTGTTGCACC GCTTACAGGT CGCCGGACGA TTTGAACCAC TGTTTACCCG TAAAGCGATT
AAGGTATTAC AGAAATATAG CGGGGGGATT CCACGCCTAA TTAACTTGCT CTGTGAACGT
GCGTTAATGG CTGGTTATGC ACAATCCCGA GTGCCAATTG ATCATCGTAT GGTGAGGCAA
GCAGCGGCTG AAGTGTTAGG TGAGGAAGAA AAACAACAGA ATCCATACCT CTGGCCAACG
GCTATTGTTG TGACTCTCGC CATTGCCTTT GGCGTATCCT ATTGGTTGTT TACCCTCAAT
CAAAGCACTA TGAGCGTTCA AGCTTCCACC GCAGAGAGTC AACCTTCTCA AAATGTTAGT
ATTGCTGCTC AAGACATAAA AGATGTAAAT AGTGAAACCC AGTTAACTCA GGCTTTAATC
AAACAACCGA GTACTCAAGC TACAATCGTA AAACCTGATC CCAGCCAACG AGTCTTAAAT
GAGGCAATAA ACCAAAGTCG TCAAATTGAT ACTGCCTTTG CTGGATTGTT CAGTGTTTGG
GGGAAAGTGC CTTTTAAAGG GCTAACAGCC TGCCAATCAG CCATTGAACA AGGGCTTTCC
TGTTATCAAC AACAGGGAAA TTGGATGTCC CTTACACGGT TAAATTATCC TGCAGTAGTA
TATTTAGTAG ATGATAATCA ACAGGATTTT TACGGTGCAG TGCTTGCTGT TGATGGTGAA
CAATTACTTA TGCAATTGGG TGAGCAGCAA CTGTGGGTTG ATAGGGCATG GTTTAATCAA
CATTTTAGCG GTACCTTTGA GATTTTATGG CAGGCACCTA GCCTACCTAT GATGGAGATC
AGCCAGAAGT CGAGCGTAGG ACAACTTCAG TGGTTGGAAA ATGCGCTTGC CCATGTGAGT
AATCGTAATG CGAGAAGGGT AACGCACTTT GATCTTAAAT TAGAAAATGA TCTCAAAGCT
TTTCAAAGCC AACATGGCTT GAAAGCTGAT GGTATTGCTG GCAACCAAAC ATTAGTGAGA
CTGAATTTGT ATTTAAGTGA GCAAGGCCCG CGTTTAACCG ATAATGGAGC ACATGGCTAA
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| Protein sequence | MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS
RCLLGQLPDN TDTAFILNPS LTELELLATL CDELKIRYGE NPTLKQLTDH LSHFLLANHE
KGRNTVLIID EAQHLRPEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA
QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAI KVLQKYSGGI PRLINLLCER
ALMAGYAQSR VPIDHRMVRQ AAAEVLGEEE KQQNPYLWPT AIVVTLAIAF GVSYWLFTLN
QSTMSVQAST AESQPSQNVS IAAQDIKDVN SETQLTQALI KQPSTQATIV KPDPSQRVLN
EAINQSRQID TAFAGLFSVW GKVPFKGLTA CQSAIEQGLS CYQQQGNWMS LTRLNYPAVV
YLVDDNQQDF YGAVLAVDGE QLLMQLGEQQ LWVDRAWFNQ HFSGTFEILW QAPSLPMMEI
SQKSSVGQLQ WLENALAHVS NRNARRVTHF DLKLENDLKA FQSQHGLKAD GIAGNQTLVR
LNLYLSEQGP RLTDNGAHG
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