| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1102 |
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| Symbol | |
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| ID | 5081710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1238409 |
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| End bp | 1240049 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498232 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001182629 |
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| Protein GI | 146292205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTTA GCACCATTGG TTTGCAATCC TTATCGCCTT ATACTCTTGC CCTCAAACAC
AAAACAACAA AAATGGAAGC AAGCTATATG ACTCTTGGTA CCAATCAGGT AAGCAAGACA
CATTCATTTA TGACTGTGTC TCTTATTGAA TTATGGGAAC GCTTTGGTTA TTACGGCATG
CAAGCGCTGA TTGTCTACTT TATGGTGCAG CGCCTTGGCT TTGATGACTC ACGTGCAAAC
TTAGTCTGGA GTGCTTGTGC GGCACTCATT TATGTATCAC CGGCCATCGG CGGTTGGGTT
GGGGATAAAA TTCTCGGCAC AAAACGCACT ATGCTGCTCG GTGCGGGGAT CCTCTCTCTG
GGTTATGCGC TAATGGCCGT ACCCACTGAA AATACGTGGT TTATGTTCTC TGCGCTCGGC
GTGATTGTGG TCGGTAACGG CCTATTCAAA CCGAATGCGG GCAACTTAGT CCGTAAAATC
TATGAAGGTG ACGATTCTAA AATCGACAGT GCTTTTACCA TCTATTATAT GGCGGTAAAC
GTAGGTTCAA CCTTCTCCAT GTTACTCACG CCTTGGATTA AAGATTACGT TAACGCCCAG
TATGGCAACG AATTTGGCTG GCATGCAGCC TTTGCCGTAT GCTGTGTAGG CTTACTTGTC
GGTTTAGGTA ACTATGCGCT TATGCATAAG AGCCTAGCAA ACTATGGATC TGAGCCTGAT
ACGCGCCCTG TCAACAAGAA GAACCTTGCG ATTGTATTAA TACTCTCAGC ACTTTCCGTG
GTCGCATCGG CGATTATTCT TGAATATGAA GATGTTGCCC GTGTATTCGT TTATGCCGCG
GGTGTGGCTG TGTTAGGGAT TTTCTTCCAT TTGATTCGTA CCAGTGAACC AAGTGAGCGC
GCTGGACTTA TCGCGGCGCT TATTCTCACG GTGCAAACGG TATTCTTCTT TATCTTCTAT
CAACAAATGT CAACGTCACT TGCCCTCTTT GCGCTACGTA ACGTCGATTG GGATTTCCAA
GTTTTTGGTA CTCATTTATG GACTTGGTCT CCTGCACAGT TCCAAGCACT TAACCCAATC
TGGATCATGG TGTTAAGCCC TGTTCTGGCG TGGAGTTATT CGTGGGCAGG TCGCAATGAT
AAAGACTTTT CTATCGCGGC GAAATTTGCA CTTGGTTTTG CCGTAGTGGC GATTGGCTTC
TTTATCTATG GTTTTGCAGG TCAATTTGCC GTCAATGGTA AAACCTCCTC GTGGATCATG
ATCTGGGGTT ATGCCTCTTA CTCTTTAGGT GAACTGCTCG TGAGCGGCTT AGGTCTTGCG
ATGATTGCTC GCTATGTACC TGCGCGCATG GGGGGCTTTA TGATGGGCGC CTATTTTGTG
GCATCAGGCA TTTCACAATA TTTAGGTGGG GTTGTCGCCA ATTTTGCCAG TGTGCCACAG
GATTTAGTCG ATCCACTGCA AACCTTACCT GTGTATACCA GTCTATTCAA CAAATTAGGG
ATTGCAGCCG TGGTTTGTAC CTTTATCGCC TTAGCCGTAT TGCCGCTAAT GCGTCGCCTA
ACGGACAGCC ACCATTCACA TAATGTGATT GATGATGACA GTGCCGCTGC ATCACTGCGC
GATGTAAAAG CCGAGCAGTA A
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| Protein sequence | MPLSTIGLQS LSPYTLALKH KTTKMEASYM TLGTNQVSKT HSFMTVSLIE LWERFGYYGM
QALIVYFMVQ RLGFDDSRAN LVWSACAALI YVSPAIGGWV GDKILGTKRT MLLGAGILSL
GYALMAVPTE NTWFMFSALG VIVVGNGLFK PNAGNLVRKI YEGDDSKIDS AFTIYYMAVN
VGSTFSMLLT PWIKDYVNAQ YGNEFGWHAA FAVCCVGLLV GLGNYALMHK SLANYGSEPD
TRPVNKKNLA IVLILSALSV VASAIILEYE DVARVFVYAA GVAVLGIFFH LIRTSEPSER
AGLIAALILT VQTVFFFIFY QQMSTSLALF ALRNVDWDFQ VFGTHLWTWS PAQFQALNPI
WIMVLSPVLA WSYSWAGRND KDFSIAAKFA LGFAVVAIGF FIYGFAGQFA VNGKTSSWIM
IWGYASYSLG ELLVSGLGLA MIARYVPARM GGFMMGAYFV ASGISQYLGG VVANFASVPQ
DLVDPLQTLP VYTSLFNKLG IAAVVCTFIA LAVLPLMRRL TDSHHSHNVI DDDSAAASLR
DVKAEQ
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