Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1058 |
Symbol | |
ID | 5081666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1183780 |
End bp | 1184715 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640498188 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_001182585 |
Protein GI | 146292161 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0194718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA TCCGCGGTAT ACATAACATT TTGTCATCTC ACCATGGGTG TGTTTTGACT ATAGGTAATT TTGACGGTGT TCATCGTGGT CACGCTCAAG TGATTACCAA CTTAGTGCAG AAGGCGAAGC AATTATCGCT GCCATCGACG GTGATGACGT TTGAACCTCA ACCACAAGAG TTGTTCAGCG GTGATAATGC TCCCGCTCGT TTGAGTTTAT TACGTGATAA AGTCATTTTA CTCGATGAGC TAGGTGTTGA GCGGTTAGTG TGTGTTAACT TTAATCGCAC TTTTGCGAGT CAACCTGCAG AGCATTTTAT TGAAGAATTG TTAGTTCGTA AGCTCGGTGT CAAATATCTG GTTGTGGGTG ATGATTTTTG TTTTGGCCAA GGCCGTAAAG GTAATTTTGA CATGCTCATG CATGCTGGGG AGCGTTTCGG CTTTACGGTT GTGAGTACGC AGAGTTTTAT TGTGGGGTCC CAGCGGGTGA GTTCCACTGC TGTGCGTGAA CAATTGGCGA AGGGCAATCT TGAGCAGGCA AGACGTCTAT TAGGTCATCC TTTTACACTC AGTGGTCGTG TTGCACATGG GCAAAAAATT GGCCGCACTA TCGGATTTCC TACTGCGAAT ATTGCCTTAA AGCGCAATGT TGTGCCGGTA CGCGGTGTGT TTGCGGTTAA ATGTTATTGG GATAACAGCG ATATTTATGA GGGCGTAGCC AATATTGGGT TTCGCCCGAC AGTGAACGGT CAAGTGTGTC AGCTTGAGGT GCATCTTTTT GATTTTGAAG ATGACATTTA CGGCAAACAT GTTGAAGTCG AGTTGGTGGC TAAACTCCGA GATGAGCAGC CTTTTGACTC ATTGGATGCG CTAAAAAAAC AGATTTTAAA TGATGCAAAT GAAGCCCGAG CTTTATTTGG TAATGATGCA GGCTGA
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Protein sequence | MELIRGIHNI LSSHHGCVLT IGNFDGVHRG HAQVITNLVQ KAKQLSLPST VMTFEPQPQE LFSGDNAPAR LSLLRDKVIL LDELGVERLV CVNFNRTFAS QPAEHFIEEL LVRKLGVKYL VVGDDFCFGQ GRKGNFDMLM HAGERFGFTV VSTQSFIVGS QRVSSTAVRE QLAKGNLEQA RRLLGHPFTL SGRVAHGQKI GRTIGFPTAN IALKRNVVPV RGVFAVKCYW DNSDIYEGVA NIGFRPTVNG QVCQLEVHLF DFEDDIYGKH VEVELVAKLR DEQPFDSLDA LKKQILNDAN EARALFGNDA G
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