Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1049 |
Symbol | |
ID | 5081751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1171977 |
End bp | 1172933 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498179 |
Product | transaldolase B |
Protein accession | YP_001182576 |
Protein GI | 146292152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00112286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAATA CGTTAGAACA ACTCAAGTCA TATACTACTA TTGTTGCAGA TACCGGTGAT ATAGAAGCAA TTAAACGCTA TCAACCTGAG GATGCGACAA CAAATCCATC TCTCATCTTA AAAGCAGCTC AAATCCCTGA ATATAGTTAT TTAATTGATA ATGCCATTGC TTGGGCACAG ACACAGAGCA CTGAACTTGA GCAACAAATT GACGATGCGA GTGATAAGCT AGCGGTCAAT ATTGGCGTTG AAATTCTGAA ACTCGTTCCA GGCCGAATCT CAACAGAGGT CGATGCCCGC CTCTCATTCG ATAAAGAAAA ATCCATTGCT AAAGCCCATA AGCTAGTACG TTTGTATCAA GAAGCTGGGA TTGATAAATC TCGCATTTTG ATCAAATTAG CGTCTACGTG GGAAGGCATT TGTGCAGCCA AGGAATTAGA GCAAGAAGGG ATTAATTGCA ATCTCACATT ATTATTCAGT TTTGCTCAGG CTCGAGCTTG CGCTGAAGCA GGCGTTTACC TGATTTCTCC TTTTGTTGGC CGTATTCTAG ATTGGTACAA AAAAGACACA GGTAAGGATT ATGCACCAGC CAATGATCCA GGTGTTGTTT CGGTTACTGA AATTTACAAC TACTACAAAC AGCACGGTTA TAACACAGTG GTAATGGGAG CCAGTTTCCG CAATATAGGT GAAATCATTG AGTTAGCAGG CTGTGACCGC TTAACTATTG GCCCTTCACT CCTAGAAGAG TTAGCCAATT CTCAAGCGCA AATTCAAGCT AAACTCTTAC CGGCGACAAC GACGGTTGCA GCAGAGACGC CTCTGACTGA AGCGCAATTC CGTTGGGACT TCAACCAAGA TCCAATGGCG GTTGAAAAGT TAGCGGAAGG TATACGTAAT TTCGCCATCG ACCAGGGCAA ACTTGAAGTA ATGCTCAAGG CAAAACTCTC AAACTAA
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Protein sequence | MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYSY LIDNAIAWAQ TQSTELEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ EAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG RILDWYKKDT GKDYAPANDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR LTIGPSLLEE LANSQAQIQA KLLPATTTVA AETPLTEAQF RWDFNQDPMA VEKLAEGIRN FAIDQGKLEV MLKAKLSN
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