| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1048 |
|---|
| Symbol | pgi |
|---|
| ID | 5081750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1170319 |
|---|
| End bp | 1171956 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498178 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001182575 |
|---|
| Protein GI | 146292151 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000131328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCT TGACCCAAAG CTCAACTTGG CAAGCTTTAT CAGCACACAC ACAAAACTTA
CCCCATATGC GGGAATTATT TGCAACTGAT GCGGCACGTT TCAAAAATAT GTCACTATCG
GCTTGTGGTT TGTTTCTCGA TTACTCAAAA AATAGAGCAA CGGCTGAAAC TCTTGAACTG
TTATTTTCCT TAGCCAAAGA CAGTCAACTC GAAGCCAAGA TTAAGGCAAT GTTTGCCGGC
GAGATAATAA ATACCACGGA AAAGCGCGCT GTATTGCATA CCGCGCTTCG CAGCAAAGCT
AGTCAGTCAA TTATTGCCGA AGGCCAAGAT ATCGTCCTAG AGGTTCAGCA AACCTTGAGT
AAAATGCAGG AATTTGTTGA AACAGTGACT TCTGGACAAT GGAAAGGATA CACAGGCAAA
GCAATAACCG ATATTGTGAG TATCGGTATT GGGGGCTCTT TTCTTGGCCC TAAAGTGGTT
TCTCAAGCCC TACGTCCATA CTGGAACCAA GGTTTAAATT GCCATTTTGT GGCAAACGTT
GATGGCACTT CTATCAGTGA AAAACTGAAG TTGCTCGATT CTGAAACCAC ACTGTTTATC
ATGTCTTCTA AGTCCTTTGG TACCCAAGAA ACACTGACAA ATACCTTAAC AGCCAAGGCC
TGGTTTTTAG CTAAAGGCGG CTTACAATCC GATGTGGCTA AGCATTTTGT TGCAGTCACG
TCAAACGTGA CTAAAGCAAC TGAGTTTGGT ATTGATGCCA ATAACATCTT CCCTATGTGG
GACTGGGTTG GTGGCCGCTA CTCGCTTTGG TCTGCCATAG GTCTGCCTAT TGCATTATTG
GTGGGTATGG ATAATTTCAG AGCCCTACTC AATGGTGCTC ACCAAATGGA TGAGCATTTT
GCCAGTGCAC CCTTGGCAGA AAATATGCCC GTCATCATGG GACTACTGTC TCTATGGTAT
GGTAATTTTT TTAATGCTCA ATCCCATGTG GTATTAACAT ACGATCACTA TCTACGTGGT
CTACCAGCCT ACTTCCAACA ACTCGATATG GAAAGTAACG GCAAGTCAGT CACACTCGAT
GGAACTGACG TTGATTACAG TACAGGTCCC GTAATTTGGG GAGGTGAAGG CACGAATGGT
CAGCATGCCT ACCACCAACT CATCCACCAA GGTACAGCAT TGATCCCTGC CGACTTTATT
ATGCCGCTGC AAAGCCATAA TCCCATTGGC GTACACCATG ATCAATTAGC ATCAAACTGC
TTTGGACAAA CCCAAGCACT TATGCAAGGT AGAACCTTCG AGGAAGCGTT AGCCGAATTG
GCGAATAGTT CGTTAACTGA TGAAGAAAAA CAGCTAATAG CAAAACATAA AGTGATGCCC
GGAAACAAAC CAAGCAATAC TTTATTGATG AACAAGCTAA CGCCAGAAAC CTTAGGTGCG
CTAATTGCGC TGTATGAACA CAGAACCTTT GTTCAAGGGG CAATATGGGA TATCAACTCC
TTCGATCAAT GGGGAGTCGA GTTAGGTAAA AATCTCGGTA ACGATGTGCT CGCGAGGATC
AGTGCTGAAC AAGATTCCAG CGCCTTAGAC GCTTCAAGTA ATGGACTGAT TAACTTGTAT
CGACAAGGTG CAATTTAA
|
|---|
| Protein sequence | MTLLTQSSTW QALSAHTQNL PHMRELFATD AARFKNMSLS ACGLFLDYSK NRATAETLEL
LFSLAKDSQL EAKIKAMFAG EIINTTEKRA VLHTALRSKA SQSIIAEGQD IVLEVQQTLS
KMQEFVETVT SGQWKGYTGK AITDIVSIGI GGSFLGPKVV SQALRPYWNQ GLNCHFVANV
DGTSISEKLK LLDSETTLFI MSSKSFGTQE TLTNTLTAKA WFLAKGGLQS DVAKHFVAVT
SNVTKATEFG IDANNIFPMW DWVGGRYSLW SAIGLPIALL VGMDNFRALL NGAHQMDEHF
ASAPLAENMP VIMGLLSLWY GNFFNAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSVTLD
GTDVDYSTGP VIWGGEGTNG QHAYHQLIHQ GTALIPADFI MPLQSHNPIG VHHDQLASNC
FGQTQALMQG RTFEEALAEL ANSSLTDEEK QLIAKHKVMP GNKPSNTLLM NKLTPETLGA
LIALYEHRTF VQGAIWDINS FDQWGVELGK NLGNDVLARI SAEQDSSALD ASSNGLINLY
RQGAI
|
|---|
| |