Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1007 |
Symbol | |
ID | 5081809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1122372 |
End bp | 1122908 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498132 |
Product | hypothetical protein |
Protein accession | YP_001182535 |
Protein GI | 146292111 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000613639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATACC GTTACCTTGC CATACTATTG AGTGCTTTAG TGTTATTAAG CGCTTGTAGC AGTAAACCGA AAAACGATTA CGATCTCAAT TACGACTTCG CCGCACTACG CAGCTTTACC CAGCTCACAC CACAGCCAAC GGACGATCCG CTAAGTGCCC AGCGTATTCA AACAGAAATC AATGATCAAT TGACTCAAAA GGGTTTTGTT GAAAATACAA CATCACCCGA TTTTAATGTC ACCTACGCCT TACTGACCCA AGATAAGCCC AAAGATTCAG GACTATCCAT TGGATTAGGC ACAGGTACAT TCGGAAGTTC GGGCGGGATT GGAATAGGTA CCAGTGTTGG CGTTCCACTG GGGAGTGATA CTGCTAAAAT TCAAACCATT CAGATAGATA TTGTGGACCC TAGGACAAAA AAGTTGATTT GGCGTGGGAG CGATAGTTTT GATTTTGATA CTGGTGGCGA TAAAAAAGCT CAAGATACGG CCAAAGCAGT CAGCCGAATT TTGGCGCAGT TCCCACCCCA AAAATAA
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Protein sequence | MGYRYLAILL SALVLLSACS SKPKNDYDLN YDFAALRSFT QLTPQPTDDP LSAQRIQTEI NDQLTQKGFV ENTTSPDFNV TYALLTQDKP KDSGLSIGLG TGTFGSSGGI GIGTSVGVPL GSDTAKIQTI QIDIVDPRTK KLIWRGSDSF DFDTGGDKKA QDTAKAVSRI LAQFPPQK
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