| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0979 |
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| Symbol | rplU |
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| ID | 5081792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1091727 |
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| End bp | 1092038 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498104 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001182507 |
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| Protein GI | 146292083 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000128697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTTCAAAG TGGTGGTAAA CAACACCGTG TAGCTGAAGG CCACACAGTT
CGTTTAGAAA AATTAGAAGT TGCTACTGGT TCAACTGTTG AGTTCGATCA AGTTTTACTG
ATCGCTGATG GTGAAACAGT GCACGTTGGT GCTCCTTTAG TAGCTGGCGG TAAAGTCGTT
GCTGAAGTAG TGAGTCATGG TCGTGGCGAG AAAGTAACTA TCGTTAAGTT CCGCCGCCGT
AAGCACCACG ACAAGAAAAT GGGCCACCGT CAGTGGTTCA CTGAAGTTAA AATTACTGCT
ATCAACGCAT AA
|
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| Protein sequence | MYAVFQSGGK QHRVAEGHTV RLEKLEVATG STVEFDQVLL IADGETVHVG APLVAGGKVV
AEVVSHGRGE KVTIVKFRRR KHHDKKMGHR QWFTEVKITA INA
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