Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0977 |
Symbol | |
ID | 5081790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1089752 |
End bp | 1090417 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498102 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001182505 |
Protein GI | 146292081 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00168707 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTTTTT CAACTTGGCA GGATTTTATT GATAACCAGC GTGCACAAAC TTACTACCAA GAGTTAATCG CATTTGTGAA CAAAGAACGA CAATTGGGCA AAGTCATTTA TCCTCCTAAA GAGGATGTTT TTAACGCTTT CAAGATGACT CCCCTTGAAA ATGTTCGAGT CGTACTCATT GGACAAGATC CTTACCATGG CCCAAATCAG GCGCATGGAT TATGCTTCTC CGTTAGGCGT GGTATTAAGC CACCACCATC ATTGGCTAAT ATGTATAAAG AACTGGTTAA TGATATTCCT GGTTTCCATA TTCCTGACCA TGGTGATTTA AGCTACTGGG CCGAACAAGG GATCTTAATG CTCAATACGG TATTAACAGT TGAGCAAGGC CAAGCTCACT CACATGCCAA TGCTGGCTGG GAGATATTTA CTACCGCAGT ATTAAAATTG TTAAACGAGC AATCTAGGCC GATTATTTTT GTGCTGTGGG GTAGCCATGC AATAAAGAAA GGTGCAGTCA TTACTGCGCC GCAGCATCAA GTGTTGTGTG GGCCGCATCC ATCCCCTTTA TCCGCCTATC GTGGATTTTT TGGTTGTGGG CATTTTTCAA AGGTGAACCA ATTGCTGACA GCGCGGGGTG AAATCCCTAT ACAGTGGCAA GTTTAA
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Protein sequence | MTFSTWQDFI DNQRAQTYYQ ELIAFVNKER QLGKVIYPPK EDVFNAFKMT PLENVRVVLI GQDPYHGPNQ AHGLCFSVRR GIKPPPSLAN MYKELVNDIP GFHIPDHGDL SYWAEQGILM LNTVLTVEQG QAHSHANAGW EIFTTAVLKL LNEQSRPIIF VLWGSHAIKK GAVITAPQHQ VLCGPHPSPL SAYRGFFGCG HFSKVNQLLT ARGEIPIQWQ V
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