Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0966 |
Symbol | |
ID | 5081779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1076428 |
End bp | 1078518 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498091 |
Product | TonB-dependent heme/hemoglobin receptor family protein |
Protein accession | YP_001182494 |
Protein GI | 146292070 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.942987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA AGCCATTAGT CATAGCGATG GCGGTAGCGC TGAGTAGTTC GACGCTGAGT TTTACATTAG CAGCCGAAGA CGTTACTAAG GCAGAGATTC AAGAGAGTGC CGATAAAGAA CTGATTACTA CTGAGTTTGA TGAAGTCCTT GTGAGTGCGA CACGCATCAG TGAAAAAGCC TCCGAAACTA GCCGTAGCGT GGCCGTTGTG GGTGAAGAAC AGCTTGCGAT TGCGCAAGCT TCTTCTGTGG CAAATGCGCT TAAACATGAG GCCAATATTT CGCTGACTAA TGGCCCAAGA GCTTCATCGC AAGGGGTTGA AATCCGTGGT TTAAGTGGCG ATAGAATTCT GCAAACGATC GATGGTGCAA GGCAAAATAC CAGTTCAGGT CATAGGGGAA CATATTTTAT GGATCCTGAA CTACTCAAAT CGGTTGAGGT ATTGCGTGGA CCCGCGAGTA GTTTGTGGGG GAGCGGTGCC CTAGGTGGTG TAGTCGCCCA GAATACTAAG TCCGCAAAAG ACTTTTTAGC CCCAAATGAG AAATTTGGTG GTTATCTTCA GCAGGGATAT GAAACCAATG GCGATCGCGT TAAAACCAGT GGTGCCGTTT ATGGACAAGA AGGCACGATT GATTGGTTAC TCAATGGTTC CTATTTCGAT TCAAATAATA TTAAAACTGG TAACGATGAA ACCCTGATCA ATAGTGCATC CGATGGTGGC AGTGGTTTGG CTAAACTAGG TTGGCAAGCT GACGAGGCAT CACGGTTAGA ATTATCAGCA AGGGTTAATA AAACCAACGA ATTAGTACCA AGTAATCCCT CTACTGTGGT CAGCAGTTCA GTTCCCTTAG TTCGTCGCCA AACTGATGAT CAAAATATCA CGTTAAATTA TAGCCTTAAC CCTACTAACA ACCCTTATTT GGACACTAAA GTACAAGTGT ATTGGAATAG TACGGACTAC GACGAAGACC GCGTGACTAA GGGGCAAAAG GACAGTACTG AGTTTAGAAC CGTAGGCGTA AATCTGAATA ACAGTTCGCG CTTAGGCAAT ACCAAGTTGA CCTATGGCGT TGATGGTTAC CGCGATACCA TCGAAACCGT TCGTGACGAT AGCGGACAAG TCGGGCAGCG CCCCGGAAAC ATTGATGGTG AAAGCACTGT TTGGGGAGCT TTTACCCGTG CAGATATTGA GTTGATTAAG ACCCTCAACT TAGATGCCGC CCTGCGCTAT GACAACTTTA AAAATGACAG TAATAACCTC AACATGTCAT CGGATGATAA TGAATTATCA CCTTCTCTTG GTTTGAGCTG GCAGACTCAA CCTTGGTTAA CATTAAGTGC CCGCTATGAC CAAGCGTTCC GCGCGCCTAC GGTGGAGGAA ATGTATTCCA GCGGGACGCA TTATTGTATT CCGCCTATCC CAGGATTCTT ACCCCAAGGT CTGTGTAACA CCTTTGCGAC CAATCCGAAT TTAAAGCCTG AAACCGCTCG TAATAAAGAA ATTAAAGCGG ACTTACGTTT TAGTGACTTG GCGGGTGATG ATGAACTGGC GGTGACCTTA AACGTCTTCC GTAACGATGT TGACGACTTT ATTGTGCAGC AGGTTTCTAA CCCTTGGCGT GGTATTCCGG GATTTGAGCA AACCACGTCA TGGAATAACG TCGAAGATGC TCGTTTAACG GGTTTTGAAA TTAGTGGCCG TTATCGCATT GGTCAAACTC GTTTAGCCAT GAATTATGGT CAAACCCATG GCGAAGATCG TAAGACAGGG GAATATATTG AAGGAATACC TGCCAATAAA TTCAATGTCG ACTTATCTCA AGGCATTATG GATGGCGATA TGAAACTGGG CACCCGAGTC ACCTATGTCG CCAGTCAGTC AAATACACCT GATGGATACA GTGTGGCGAA ATACGATGAT TACAAACTGT GGGATATCTA CGTTGCATGG GAGCCTACTA TGGGGGTGAT GTCGGGTGTG AGAGTGGATT TTGCCGTTGA AAATATCGGC GATGAACAGT ATCAACAGGC ATGGCAAACC TTGTATCAGC CAGGGCGAAA TATGAAGTTA TCGGCGCGTT ATATGTTCTA A
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Protein sequence | MKKKPLVIAM AVALSSSTLS FTLAAEDVTK AEIQESADKE LITTEFDEVL VSATRISEKA SETSRSVAVV GEEQLAIAQA SSVANALKHE ANISLTNGPR ASSQGVEIRG LSGDRILQTI DGARQNTSSG HRGTYFMDPE LLKSVEVLRG PASSLWGSGA LGGVVAQNTK SAKDFLAPNE KFGGYLQQGY ETNGDRVKTS GAVYGQEGTI DWLLNGSYFD SNNIKTGNDE TLINSASDGG SGLAKLGWQA DEASRLELSA RVNKTNELVP SNPSTVVSSS VPLVRRQTDD QNITLNYSLN PTNNPYLDTK VQVYWNSTDY DEDRVTKGQK DSTEFRTVGV NLNNSSRLGN TKLTYGVDGY RDTIETVRDD SGQVGQRPGN IDGESTVWGA FTRADIELIK TLNLDAALRY DNFKNDSNNL NMSSDDNELS PSLGLSWQTQ PWLTLSARYD QAFRAPTVEE MYSSGTHYCI PPIPGFLPQG LCNTFATNPN LKPETARNKE IKADLRFSDL AGDDELAVTL NVFRNDVDDF IVQQVSNPWR GIPGFEQTTS WNNVEDARLT GFEISGRYRI GQTRLAMNYG QTHGEDRKTG EYIEGIPANK FNVDLSQGIM DGDMKLGTRV TYVASQSNTP DGYSVAKYDD YKLWDIYVAW EPTMGVMSGV RVDFAVENIG DEQYQQAWQT LYQPGRNMKL SARYMF
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