| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0946 |
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| Symbol | |
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| ID | 5081858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1056243 |
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| End bp | 1057286 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498071 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001182474 |
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| Protein GI | 146292050 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAGA CCTTAAAGAT CAATACCTCA GCATTAAAGT ATTCAGTGAA CTGGCTAGTC
CTCGTAGGGC TGGCCTTTTT TGTTTCAGCC TGTTCAAAGC AAAATGAAGT CATTTCGTTA
GCTGGCAGTA CTATGGGCAC GACTTATCAT ATTAAAGTCG TCCCGAATGA GCAGATGCCA
ACGGCGCAGT TACTTCAAGC GGAAATTGAT TTAGCCCTTG AGCTAGTCAA TGACCAGATG
TCGACGTATC GACCTCATTC AGAATTATCC CGTTTCAACC AATTGCCATT AGAGCAAAGC
GTTGAAGTCT CACCAGATAC CATTAAAGTG GTGCAAGAGG GAATACGTTT ATATCAAGTG
ACGGATAAGG CACTTGATAT TACCTTAGGT CCTTTGGTTA ATCTGTGGGG ATTTGGGCCA
GACAAGCGCC CCACTAAAGT CCCCACTCAA GCTGATATTG ATGCAGCGAA AGCGAAAACG
GGAATTAGTG AACTCTCTGT TGAAGGTAAT CGTTTAAGAA AGCACAATGC CCATTTATAT
GTTGATCTTT CATCGATAGC TAAAGGCTTT GGTGTTGATA AAGTGGCTTC TATTTTAGAT
AAATATCATG CTAGCGGTTA TCTAGTGGAA ATTGGCGGCG AGCTGAGTAT TAAAGGAACC
AAGGGAGATG GTAGCTCTTG GCGCGTGGCT ATAGAGCAGC CAACCGATGA GGGTGTGGCA
GTACAACAGG TGATTGAGCC AGGCACTATG GCAATGGCGA CCTCTGGTGA TTATCGTAAT
TACTACGAGG AAGATGGCCA ACGGTTTACC CATATTATTG ATCCCCGCAC TGGTTTACCT
GTCAATCATA AGCTAGCCTC TGTGACCGTT TTGCATAAAG ATTGTATGAC CGCGGACGGT
TTTGCGACGG CAATGATTGT TTTGGGTACT GAAGCATCAT TGGAGCTTGC CAAGAAAGAA
CACTTGGCGA TAATGCTAAT AGAAAAGCAA GGCGAAGGAT TTAAAGTTTA CTACAGTGAC
GCCTTCAAGC CTTTCCTTAA GTAG
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| Protein sequence | MFQTLKINTS ALKYSVNWLV LVGLAFFVSA CSKQNEVISL AGSTMGTTYH IKVVPNEQMP
TAQLLQAEID LALELVNDQM STYRPHSELS RFNQLPLEQS VEVSPDTIKV VQEGIRLYQV
TDKALDITLG PLVNLWGFGP DKRPTKVPTQ ADIDAAKAKT GISELSVEGN RLRKHNAHLY
VDLSSIAKGF GVDKVASILD KYHASGYLVE IGGELSIKGT KGDGSSWRVA IEQPTDEGVA
VQQVIEPGTM AMATSGDYRN YYEEDGQRFT HIIDPRTGLP VNHKLASVTV LHKDCMTADG
FATAMIVLGT EASLELAKKE HLAIMLIEKQ GEGFKVYYSD AFKPFLK
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