Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0937 |
Symbol | |
ID | 5081849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1045916 |
End bp | 1047025 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498062 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_001182465 |
Protein GI | 146292041 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.592464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAGT TTGGTAGCCT GCTTTTAGCG GTATTACTTT TAGGATTAGG TGGTTGTAAG CCACCATCCA GCAATACAGA AAAGGCAACA CCAGACATTG CACTTAGAGC CGATGCGCAG ATTATTGAAT GGAAACTCGC GACCTCTTGG CCTAAAAACT TTCCTGGCTT AGGTATGGCT CCCGAACGAT TTGCACGTTT AGTTGATGAG ATGTCCAATG GCCGTTTAAA AATCACTGTC TATGGTGCGG GTGAGCTTAT GCCCGCTTTT GCTGTTTTTG ATGGCGTGAG TCAGGGCAAA ATTCAAATGG CCCACGCGAC TTCCTTCTAC TGGAAAGGTA AATCTCCTGC GGCGCAGTTT TTTTCATCGA TTCCCTTTGG TATGACTGCA CAAGAAATGA ATGGTTGGCT TCACTATGGT GGCGGTATGG CACTGTGGGA AGAGGTCTAT CGACCCTTTG GGGTTATTCC GCTGGCGGGG GGCAATACGG GGATGCAAAT GGGCGGTTGG TTTAATAAGC CCATTAATAC CATTGCCGAT TTTAAAGGAT TGAGGGTCCG TATGCCGGGA TTGGGTGGGG AAGTCTTAAA ACGTGTTGGC GCTGTACCTG TTAATATGGC GGGGCGTGAG ATCTATACAG CGTTGCAAAC AGGTTCAATC GATGCGGCAG AATGGGTTGG ACCCGTCAAT GATCTTGCTT TTGGCTTGCA TAAAGTGGCT AAGTTTTACT ATTACCCCGG CTGGCATGAA CCTGGTTCAA ATATGGAATT TTTGATTAAT AAAGCGGCAT TTGAGAGTTT GCCCGCCGAT CTTATGGCTA TAGTCAAGGT TGCTGCCCGA GCCATTAATC AAGATATGCT TGATGAATAT ACTTCCCGCA ATGTGTTAGC ACTTGATACA TTGGTCAAAG ATAAAGGGGT GGTATTGAAA GAATTTCCCC CTGCGGTGTT GTCCGAGCTT GAGAGAATTT CAAGTCAAGT TATTGGGGAC CAAGCAAATC AAGATCCTTT GATGAAGATT GTCCATGATG CATACCGAAC CTATGAGAGA GGTGTGCGCC AATATCACAA AATATCAGAA GATGCCTATA GTCAGCATCG TCAGCATTAG
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Protein sequence | MHKFGSLLLA VLLLGLGGCK PPSSNTEKAT PDIALRADAQ IIEWKLATSW PKNFPGLGMA PERFARLVDE MSNGRLKITV YGAGELMPAF AVFDGVSQGK IQMAHATSFY WKGKSPAAQF FSSIPFGMTA QEMNGWLHYG GGMALWEEVY RPFGVIPLAG GNTGMQMGGW FNKPINTIAD FKGLRVRMPG LGGEVLKRVG AVPVNMAGRE IYTALQTGSI DAAEWVGPVN DLAFGLHKVA KFYYYPGWHE PGSNMEFLIN KAAFESLPAD LMAIVKVAAR AINQDMLDEY TSRNVLALDT LVKDKGVVLK EFPPAVLSEL ERISSQVIGD QANQDPLMKI VHDAYRTYER GVRQYHKISE DAYSQHRQH
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