Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0885 |
Symbol | |
ID | 5081896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 982880 |
End bp | 986071 |
Gene Length | 3192 bp |
Protein Length | 1063 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640498010 |
Product | acriflavin resistance protein |
Protein accession | YP_001182413 |
Protein GI | 146291989 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACTC CAAAAGGGAT TATCGCTTGG TTTGCCCGAA ACAGTGTGGC AGCTAACCTT TTGATGTGGG CGCTACTGAT TGGCGGCCTT TTTAGTACCG TACTGATCAA TAAGGAAGTA TTTCCTTCAT TCAACCTGAA TTTACTGAGT ATCTCTGTCG CATACCCAGG CGCTGCCCCT CAGGAAATTG AAGAAGGCAT CAATATCAAA ATTGAAGAAG CCATCCAAGA TATCAATGGC ATTAAGAAGG TGACTTCGGT TGCCAGTGAA GGTGTAGGAT CAATTACCAT CGAAGTTGAA GATGGCTACG ATGTACAAAA CGTCTTAGAC GAGGCCAAAC TTAGGCTAGA TGCTATCTCC ACCTTCCCTG TAAATATCGA AAAACCCAAT ATTTATCAGA TCAAACCCGA AAATAACGTT ATTTGGGTAT CTGTTTATGG CGATATGACA CTGCATGATA TGAAGGAATT AGCTAAATCG GTTCGTGACG ATTTAACTCA ATTGCCTGCC GTGACCCGCG CCAAAGTCAC TGGAGTTCGA GATTATGAAA TCAGTATCGA AGTCTCTGAG GATAAGTTAC GTGAATATGG CCTAACCTTC TCACAGGTCG CACTAGCAGT ACAAAATTCC TCCATCGATT TGCCCGGCGG TTCGATTCGT GCCGAGGATG GCGATATTCT GCTGCGTACT AAAGGCCAAG CCTACACGGG GGATGACTTT GCCAATATAG TGCTGACCAC CCGCGCCGAT GGCAGTCGAG TGATGTTGCC CCAAGTGGCA ACAATCAAAG ACGATTTTGA AGAACGCTTG GAATACACCC GCTTTAATGG CAAACCCGCA GCCATTATCG AAGTCATCAG TATTGATGAT CAAAACGCCT TAGATATTGC AGCCCAAGTT AAACAATATG TCGAGAACCG ACGCGCTACA CTGCCAGCGA ATGCACAGCT CGACACTTGG GGGGATATGA CCCATTACCT CCAAGGCCGC TTAAATATGA TGATGTCAAA CATGTTCTAC GGCGCTTTGC TGGTTTTTCT TATCTTGGCA TTGTTCCTCG ATCTGAAACT GGCATTCTGG GTGATGGTGG GACTACCAGT GTGCTTCCTC GGCACTATGC TCATCATGCC GCTAGAACCT TTCTCTATGA CCATCAACAT GTTGACCCTA TTCGCTTTTA TCCTTGTACT CGGGATTGTG GTGGATGATG CCATTGTTAT TGGAGAGAGC GCATACAGTG AAGTGGAACG CCACGGCCAC TCAATCGATC ATGTGATCCG TGGTGCCCAA AAAGTCGCTA TGCCAGCGAC CTTTGGGGTA TTAACTACAA TCGCAGCCTT TATTCCTATG TTGCTAGTTT CGGGTCCTAT GGGGATCATT TGGAAATCTA TCGGCATGGT GGTAATCATG TGCCTTGCAT TCTCCTTAGT CGAATCTAAA TTTATTCTTC CTGCGCATTT AGCACATATG AAGTTTAAAA AACCGGGTGA GCCTAGGGGA GCATTTGGGC GTTTCAAGGC AAAATTTAAC AACGGTGTAC AACACTTTAT TCACCACCAT TATCGTCATT TTCTCGAGTT TTGTATCAAG CACCGCTATA ACGTCGTCGC CGCCTTTATT GGAGTATTGA TTTTATCCAT TGCCCTCGTC GCGAGCGGTA AAGTGCGTTG GGTATTCTTC CCCGATATTC CATCTGATTT TATTCAAGTT CAGCTTGAAA TGGACGAAGG TAGCTCCGAG CCAAACACCC TGAAAGTGGT GCAGAGCATT GAAGAAGCGC TGTATCAAAT GAATGCCAAG ATGGAGAAAG AAAACGGCTA TCAAGTTGTC AAACATAGCT TTATCAATAT GAGTTCTCGC ACTTCAGCAT TTATCTTTGC CGAACTCACC AAGGGTGAAG ATAGAGAAGT TGATGGTGTT ACCATTGCGG CCGCTTGGCG TGAACAGCTC CCTGAACTGC TATCCGTTAA AAAGCTGAAT TTTGATGCCA GTACTAATGC TGGTGGCGGT GGGGATATTT CTTTTAGATT AACCTCAACG GATCTCGAAG AGTTATCCGC AGCATCGCGC GATCTCAAAC AAAAGCTGGC AACCTATGAA GGTGTATATG ATATTGCAGA CAACTTCTCA TCGGGTAGCC ACGAGATTCG CTTAAAAATA CGCCCAGAAG CCGAAGCCCT AGGATTAACA CTTTCCGATT TAGCTCGTCA GGTACGTTAT GGTTTTTATG GCTATGAGGC ACAACGTATT TTACGTAATA AAGAAGAAAT TAAAGTCATG GTGCGCTACC CATTAGAACA GCGTCGAACC GTCGGCTATT TGGAGAATAT GCTGATCCGT ACTCCACAAG GCGCATCAGT CCCCTTCTCC ACTGTGGCAC AAATTGAAAA GGGAGACTCC TATGCTTCTA TCACCCGTGT AGATGGTAAA AGAGCCATTA CTATCACGGC AAATGCCAAT AAAAACAAAG TTGAACCTTC CAAGGTGGTA CAGGAAATTC AAAAAGATTA TCTGCCACAA TTGCAGGCCA AGTATCCCAA AATTCAAACG GCATTAGATG GCGGCAGCTT GGATGAGCAA AATGCCATGG TGGGGTTAAT ACAGGGCTTT TTCTTTGCCC TGTTCACCAT TTATGCTTTG ATGGCGGTTC CGCTCAAGTC CTACAGCCAA CCACTTATCA TCATGTCGGT CATCCCCTTT GGGATTATCG GAGCACTCTT TGGTCATTTA GTCCAAGGGC TCGCAATGAG CGTATTAAGC CTTTGTGGCA TAGTGGCACT GGCGGGAGTG GTAGTAAACG ACTCATTGAT TTTGGTCGAC TTTGTTAACA GAGCGCGGGA GCAAGGGCTT TCGGTCAGAC AGGCGGCAAT CGACTCTGGC TGCTATCGCT TTAGGGCAAT TATTCTGACA TCACTCACGA CCTTCGTTGG ACTCGTGCCC ATTATTCTCG AACGCAGTTT ACAGGCACAA ATAGTGATCC CAATGGCAAC CTCTCTCGCC TTTGGTATCT TATTTTCGAC AGTTGTAACA CTGATCTTAG TCCCGCTGCT CTATATCATT CTTGATGATG CTAAACGTAC CGGTAGTCGA TTTTTCCACT GGTGGTGGCG TCCTAAAAAA GCCGAAGATA TGCATATAGA CACGGCAGGC ACTCACACGG TGGAGTTTAA GTCCCTAAAC GAAAAGCTAT AA
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Protein sequence | METPKGIIAW FARNSVAANL LMWALLIGGL FSTVLINKEV FPSFNLNLLS ISVAYPGAAP QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITIEVE DGYDVQNVLD EAKLRLDAIS TFPVNIEKPN IYQIKPENNV IWVSVYGDMT LHDMKELAKS VRDDLTQLPA VTRAKVTGVR DYEISIEVSE DKLREYGLTF SQVALAVQNS SIDLPGGSIR AEDGDILLRT KGQAYTGDDF ANIVLTTRAD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVISIDD QNALDIAAQV KQYVENRRAT LPANAQLDTW GDMTHYLQGR LNMMMSNMFY GALLVFLILA LFLDLKLAFW VMVGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYSEVERHGH SIDHVIRGAQ KVAMPATFGV LTTIAAFIPM LLVSGPMGII WKSIGMVVIM CLAFSLVESK FILPAHLAHM KFKKPGEPRG AFGRFKAKFN NGVQHFIHHH YRHFLEFCIK HRYNVVAAFI GVLILSIALV ASGKVRWVFF PDIPSDFIQV QLEMDEGSSE PNTLKVVQSI EEALYQMNAK MEKENGYQVV KHSFINMSSR TSAFIFAELT KGEDREVDGV TIAAAWREQL PELLSVKKLN FDASTNAGGG GDISFRLTST DLEELSAASR DLKQKLATYE GVYDIADNFS SGSHEIRLKI RPEAEALGLT LSDLARQVRY GFYGYEAQRI LRNKEEIKVM VRYPLEQRRT VGYLENMLIR TPQGASVPFS TVAQIEKGDS YASITRVDGK RAITITANAN KNKVEPSKVV QEIQKDYLPQ LQAKYPKIQT ALDGGSLDEQ NAMVGLIQGF FFALFTIYAL MAVPLKSYSQ PLIIMSVIPF GIIGALFGHL VQGLAMSVLS LCGIVALAGV VVNDSLILVD FVNRAREQGL SVRQAAIDSG CYRFRAIILT SLTTFVGLVP IILERSLQAQ IVIPMATSLA FGILFSTVVT LILVPLLYII LDDAKRTGSR FFHWWWRPKK AEDMHIDTAG THTVEFKSLN EKL
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