| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0850 |
|---|
| Symbol | |
|---|
| ID | 5081961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 943114 |
|---|
| End bp | 944346 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640497975 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit B |
|---|
| Protein accession | YP_001182378 |
|---|
| Protein GI | 146291954 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
|---|
| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0586071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC AAGTTAAAAA ACCTGATTTA CAGGACGCCC CAGATTTACA ACAAGAGTAC
TACGCAACGG GTAAGTCGAT GAAAGGCTTT TTGCGCTCAT TGGTTATTGC CAGTGGTCGC
AGCACTAAGG GGCAAGTACA TGTACGTGAC GCAATTGACG TAAAACGTAC TATGACCTTA
GTCGGCCTTT GTTTACTACC TGCCATTTTA TTTGGTTTAT ATAACGTGGG TTTACAGGCT
CAGATTGCGC TCTCTACAGG ATTAACCACA CCTGATACTT GGAAGCTTAT TATCTTTAAT
AGCCTTTCAG GAGGGTTAAG CGAGCAAACT GGGGTGGTGG GCTTATTTCT CTATGGCCTA
AGTTTCTATT TACCCATCTA TCTCACCGCA TTGCTAACCA GTTTATTTTG GGAAGTAGTG
TTTGCGCGGG TTCGTGGTCA AGAATTACAC GAAGGCTTCT TCGTGACAGC GCTATTGTTT
ACCTTAATCT TACCTGTATC AACACCACTA TGGCTGGTGG CCATGGGGAT TTGCTTCGGT
GTTGTTGTGG CTAAGGAGCT ATTTGGTGGT ATGGGATATA ACTTCCTAAA CCCTGCACTA
GCGGGCCTTG CCTTTATTTA CTTTGCCTAT CCATCTGAAG TGTCTACCGT AAAACAGTTA
GTGGCCGTTG ATGGTTTTGC CGGCGCAACG GCGCTGGCAC AAACCGCAGC GGGCAAACTG
AGTTTTGCCG ATTACTCTTG GTTTAGCGCC TTTAGCGATC CTAACTGGTG GAACAACTTT
TTTGGTTTTA CCGTGGGTGC CATTGGTGAA ACCAGCACCT TAGCGATTTT AATCGGCGGG
GCATTCCTGC TGATCAGCCG TTTAGCCGAT TGGCGTATTG TTGCTGGTGT AATGCTTGGC
ATGATAGCCA CCGCAAGCCT GTGTAATTTG ATTGGTTCTA ACAGCAACCA AATGATGGCA
ATGCCATGGA CTTGGCATCT TGTGACGGGT GGTTTTGCGT TGGCGATGAT GTTTATGGCG
ACTGACCCCG TAACGACTTC TTACACTCGT CCAGGCAAAT ATATTTACGG TGCCTTGATT
GGGTTTATGA CTGTGCTTAT CCGTGTCGCG AACCCCAAAA TGGCAGAGGG CGTGATGTTA
GCGATTCTGT TTGCCAACCT TTGGGCGCCG TTGTTCGATT ATCTGGTGGC CCGCGCCAAC
ATCAAACGGA GATTAAAACG TCATGGTATT TAA
|
|---|
| Protein sequence | MTKQVKKPDL QDAPDLQQEY YATGKSMKGF LRSLVIASGR STKGQVHVRD AIDVKRTMTL
VGLCLLPAIL FGLYNVGLQA QIALSTGLTT PDTWKLIIFN SLSGGLSEQT GVVGLFLYGL
SFYLPIYLTA LLTSLFWEVV FARVRGQELH EGFFVTALLF TLILPVSTPL WLVAMGICFG
VVVAKELFGG MGYNFLNPAL AGLAFIYFAY PSEVSTVKQL VAVDGFAGAT ALAQTAAGKL
SFADYSWFSA FSDPNWWNNF FGFTVGAIGE TSTLAILIGG AFLLISRLAD WRIVAGVMLG
MIATASLCNL IGSNSNQMMA MPWTWHLVTG GFALAMMFMA TDPVTTSYTR PGKYIYGALI
GFMTVLIRVA NPKMAEGVML AILFANLWAP LFDYLVARAN IKRRLKRHGI
|
|---|
| |