Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0828 |
Symbol | |
ID | 5081939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 918472 |
End bp | 919131 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497954 |
Product | aromatic acid decarboxylase |
Protein accession | YP_001182357 |
Protein GI | 146291933 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTACC CAAAGTCGAC TAAGGCAATT AGCTTAGCTT GGACTGGCGC CTCGGGCGCT CCCTATGGAC TGAAGTTACT CGAATGTCTG TTGGCTTCTG GTTTTCAAGT GTTTTTGATG ATTTCGAGTG CGGCGCGAGT GGTGTTAGCG ACAGAGCACG GTTTGCAACT CAGTGCGAAT AGCGAAAAAG CGAAACAACA ACTGCTTGCT GTATTGGCAG AAAAAAATGC GGCTATTGTG GGGGAATTGG TTGTGCTTGG TAAGGATGAG TGGTTTTCTC CCCCCGCATC AGGCAGCGCC GCACCTAAAC AAATGGTCAT TTGTCCTTGC TCGACAGGAA CACTCGCGGC GGTTGCGACA GGAATGAGCA ATAATCTGCT TGAACGAGCC GCAGATGTGG TGATTAAAGA ACGCGGACAG CTTATCCTAG TGCCCAGAGA AACCCCTTTT AGTGCTATAC ATCTCGAACA TATGTTGAGC CTTTCTCGCC TCGGTGTGAC GATTATGCCT GCGGCGCCCG GTTTTTATCA CAATCCCAAA TCGGTGGAAG ATCTGGTAGA CTTCATGGTC GCTCGAATTC TCGATCATTT GGGCGTTGAC CATGCACTAA CGAGTCGCTG GGGGTATGAC AAGCAGACCC ACCGTGACCT CGACAATTGA
|
Protein sequence | MVYPKSTKAI SLAWTGASGA PYGLKLLECL LASGFQVFLM ISSAARVVLA TEHGLQLSAN SEKAKQQLLA VLAEKNAAIV GELVVLGKDE WFSPPASGSA APKQMVICPC STGTLAAVAT GMSNNLLERA ADVVIKERGQ LILVPRETPF SAIHLEHMLS LSRLGVTIMP AAPGFYHNPK SVEDLVDFMV ARILDHLGVD HALTSRWGYD KQTHRDLDN
|
| |