| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0815 |
|---|
| Symbol | |
|---|
| ID | 5081926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 907056 |
|---|
| End bp | 907466 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640497941 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_001182344 |
|---|
| Protein GI | 146291920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTGTT TTTATGGCCT AATTCCTGCT ATAACCGTGC AAATTAACCC TGCTACTTGT
TGGAGAATAA CGTTGAAACT GGTCACCACA ATAATTAAAC CGTTCAAATT AGACGATGTA
CGTGAAGCTC TAACCCAACT GGGTATAAAT GGCATGACGG TTACAGAAGT CCGCGGCTTT
GGTCGTCAAA AGGGGCATAC AGAACTCTAT CGTGGTGCCG AATACGCTGT CGATTTTTTA
CCTAAAATAA AACTTGAAAT GGCCATCCAT ACTGAGCAGG AAGACGCCGT CATTGAAGCC
ATTATGACAG CCGCGCATAC AGGTAAAGTA GGCGATGGAA AAATCTTTGT GACGGATCTT
GAACAAGTAG TACGCATCCG CACCTCAGAA GAAGGTGCCG ATGCAATATG A
|
|---|
| Protein sequence | MLCFYGLIPA ITVQINPATC WRITLKLVTT IIKPFKLDDV REALTQLGIN GMTVTEVRGF
GRQKGHTELY RGAEYAVDFL PKIKLEMAIH TEQEDAVIEA IMTAAHTGKV GDGKIFVTDL
EQVVRIRTSE EGADAI
|
|---|
| |